RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 SHDQ96IW2 340 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 SMOC1Q9H4F8 434 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 DMRT1Q9Y5R6 373 aa12.53□□□□□ -0.4
CHRNA3-201ENST00000326828 ZNF726A6NNF4 738 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 GPR173Q9NS66 373 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 ZDHHC8Q9ULC8 765 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 SLC7A11Q9UPY5 501 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 HDGFL3Q9Y3E1 203 aa12.52□□□□□ -0.4
CHRNA3-201ENST00000326828 VSTM2BA6NLU5 285 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 E5RGE8 158 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 CTHP32929 405 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 AFF3P51826 1226 aaKnown RBP12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 HSD11B2P80365 405 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 MYBPHQ13203 477 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 HEPN1Q6WQI6 88 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 UEVLDQ8IX04 471 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 TMEM123Q8N131 208 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 INTS12Q96CB8 462 aaKnown RBP12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 GABRG3Q99928 467 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 NSG2Q9Y328 171 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 POMT1Q9Y6A1 747 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF814B7Z6K7 855 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF728P0DKX0 622 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 CAPZBP47756 277 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 RHEBQ15382 184 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF160Q9HCG1 818 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 PIGLQ9Y2B2 252 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 HS3ST3B1Q9Y662 390 aa12.52□□□□□ -0.41
CHRNA3-201ENST00000326828 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 SOD3P08294 240 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 RABIFP47224 123 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 STARD6P59095 220 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 NKX6-1P78426 367 aaPredicted RBP12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 DLK1P80370 383 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 OR2AE1Q8NHA4 323 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 CRLF2Q9HC73 371 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 OR5H15A6NDH6 313 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF724A8MTY0 619 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 PNLIPP16233 465 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 HOXA5P20719 270 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 PAX6P26367 422 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 CDX1P47902 265 aaPredicted RBP12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 YPEL5P62699 121 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 NTNG2Q96CW9 530 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 TPSD1Q9BZJ3 242 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 AK3Q9UIJ7 227 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 LTBP2Q14767 1821 aa12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 DIDO1Q9BTC0 2240 aaKnown RBP12.51□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNHIT1O43257 154 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 P2RY1P47900 373 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF574Q6ZN55 896 aaPredicted RBP12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 PLEKHA2Q9HB19 425 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 IGHV4-34P06331 123 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 GABRG2P18507 467 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 MTCP1P56278 107 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 RND3P61587 244 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 FAM69BQ5VUD6 431 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 C14orf144Q96I85 54 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 CHST5Q9GZS9 411 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 LMAN1LQ9HAT1 526 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 NOSIPQ9Y314 301 aaKnown RBP12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 IGHV3-15A0A0B4J1V0 119 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 RBFOX3A6NFN3 312 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 H3BP45 60 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 EFNA2O43921 213 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 SSSCA1O60232 199 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 SEC11BP0C7V7 166 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 NDUFB7P17568 137 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 FBLP22087 321 aaKnown RBP12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 SLC38A9Q8NBW4 561 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 CA5BP1Q8WTZ4 195 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
CHRNA3-201ENST00000326828 THADAQ6YHU6 1953 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 ST8SIA3O43173 380 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 IGHG1P01857 330 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
CHRNA3-201ENST00000326828 SPINK2P20155 84 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms