RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 AKIRIN1Q9H9L7 192 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 GPR173Q9NS66 373 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 PLEK2Q9NYT0 353 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 AK3Q9UIJ7 227 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 TIMM10BQ9Y5J6 103 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 IGKV1-27A0A075B6S5 117 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 IGHV3-15A0A0B4J1V0 119 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 E5RGE8 158 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 NPIPA2E9PIF3 369 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 NPIPA3F8WFD2 350 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 H7C1Q1 480 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 MBPP02686 304 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 LMO1P25800 156 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 EPHA8P29322 1005 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 RPL35P42766 123 aaKnown RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 ID4P47928 161 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 MTCP1P56278 107 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 DSCR4P56555 118 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 PIGPP57054 158 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 STARD6P59095 220 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 HGFACQ04756 655 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 PEA15Q15121 130 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 RAB35Q15286 201 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 RSPO4Q2I0M5 234 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 PPP1R3BQ86XI6 285 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 MAML2Q8IZL2 1156 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 ZNF837Q96EG3 531 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 IMMP1LQ96LU5 166 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 CCDC74BQ96LY2 380 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SULT4A1Q9BR01 284 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 NAA11Q9BSU3 229 aaPredicted RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 FAAP24Q9BTP7 215 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 RBM24Q9BX46 236 aaKnown RBP7.58□□□□□ -1.2
CLK1-201ENST00000321356 NAA60Q9H7X0 242 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SH2D2AQ9NP31 389 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 SMCO4Q9NRQ5 59 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 NECAP2Q9NVZ3 263 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 ZNF581Q9P0T4 197 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 NSG2Q9Y328 171 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 KPTNQ9Y664 436 aa7.58□□□□□ -1.2
CLK1-201ENST00000321356 IGHV1-45A0A0A0MS14 117 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 MASP2O00187 686 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 SYNGR3O43761 229 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 ANGPTL7O43827 346 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 IFNA4P05014 189 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 CELA2AP08217 269 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 DANCRP0C864 163 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 ZNF728P0DKX0 622 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 CCL3P10147 92 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 AKR1D1P51857 326 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 RSU1Q15404 277 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 HMGN3Q15651 99 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 TAF9Q16594 264 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 KRTAP27-1Q3LI81 207 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 FAM76BQ5HYJ3 339 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 GPR157Q5UAW9 335 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 TMEM42Q69YG0 159 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 GPR137CQ8N3F9 429 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 C15orf54Q8N8G6 183 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 C18orf12Q96KH6 178 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 GNRHR2Q96P88 292 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 C12orf57Q99622 126 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 CMSS1Q9BQ75 279 aaKnown RBP7.57□□□□□ -1.2
CLK1-201ENST00000321356 GINS3Q9BRX5 216 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 DUSP23Q9BVJ7 150 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 SUCNR1Q9BXA5 334 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 ULBP2Q9BZM5 246 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 FAM212BQ9NTI7 297 aaPredicted RBP7.57□□□□□ -1.2
CLK1-201ENST00000321356 NXT1Q9UKK6 140 aaKnown RBP7.57□□□□□ -1.2
CLK1-201ENST00000321356 KCNIP3Q9Y2W7 256 aa7.57□□□□□ -1.2
CLK1-201ENST00000321356 LSM5Q9Y4Y9 91 aaKnown RBP7.57□□□□□ -1.2
CLK1-201ENST00000321356 A0A0J9YW62 118 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 OR6C6A6NF89 314 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 PCP4L1A6NKN8 68 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 AGPAT2O15120 278 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 SGCEO43556 437 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 DNPH1O43598 174 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 SPRY1O43609 319 aaPredicted RBP7.56□□□□□ -1.2
CLK1-201ENST00000321356 CST2P09228 141 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 OR5AC1P0C628 307 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 FGF5P12034 268 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 OPRM1P35372 400 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 SNCAP37840 140 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 KCNJ3P48549 501 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 RBP2P50120 134 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 RRADP55042 308 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 CNN3Q15417 329 aaKnown RBP7.56□□□□□ -1.2
CLK1-201ENST00000321356 RAET1LQ5VY80 246 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 OR10AD1Q8NGE0 317 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 OR2AE1Q8NHA4 323 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 SFT2D1Q8WV19 159 aa7.56□□□□□ -1.2
CLK1-201ENST00000321356 RTN4IP1Q8WWV3 396 aaPredicted RBP7.56□□□□□ -1.2
CLK1-201ENST00000321356 MSI2Q96DH6 328 aaKnown RBP7.56□□□□□ -1.2
CLK1-201ENST00000321356 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
CLK1-201ENST00000321356 MARS2Q96GW9 593 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms