RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CLN8Q9UBY8 286 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 RP1L1Q8IWN7 2480 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 RPL36A-HNRNPH2H7BZ11 118 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 IGHG3P01860 377 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 NFYAP23511 347 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 NPY4RP50391 375 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 MADCAM1Q13477 382 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TESK1Q15569 626 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SPATA46Q5T0L3 261 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 DOLPP1Q86YN1 238 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SSC4DQ8WTU2 575 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SMIM4Q8WVI0 70 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TIMP4Q99727 224 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 MYEF2Q9P2K5 600 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SERPINE3A8MV23 424 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 GFRA1P56159 465 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CAV3P56539 151 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PLAURQ03405 335 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 C3AR1Q16581 482 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 Q6ZNX1 250 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 H2BFWTQ7Z2G1 175 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SRRQ9GZT4 340 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ZMAT5Q9UDW3 170 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CRYM-AS1A6NIL9 109 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 E9PLN8 166 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 DKK1O94907 266 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ALX3O95076 343 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CLEC3BP05452 202 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF728P0DKX0 622 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CDAP32320 146 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ZFP69Q49AA0 526 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TSPO2Q5TGU0 170 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM91Q6ZNR0 172 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ACBD4Q8NC06 268 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 GALMQ96C23 342 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 RASL11BQ9BPW5 248 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 VKORC1Q9BQB6 163 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 RTN4RQ9BZR6 473 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TRBV5-7A0A0A0MS05 114 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 RPS27P42677 84 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 LHX2P50458 406 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 RAG2P55895 527 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TBRG1Q3YBR2 411 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 FAM58AQ8N1B3 248 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ABHD3Q8WU67 409 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ADGRG7Q96K78 797 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 COMMD5Q9GZQ3 224 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ZDHHC11Q9H8X9 412 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC39A9Q9NUM3 307 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 THYN1Q9P016 225 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PITPNC1Q9UKF7 332 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 OTOGLQ3ZCN5 2332 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 TGM6O95932 706 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CLDN18P56856 261 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ERVFRD-1P60508 538 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PMP22Q01453 160 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 Q0VFX4 171 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 ETFDHQ16134 617 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 GABRA6Q16445 453 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PDLIM3Q53GG5 364 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 LYSMD2Q8IV50 215 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PLPPR2Q96GM1 343 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 PGLYRP3Q96LB9 341 aa7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 OPN3Q9H1Y3 402 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-201ENST00000317968 CEP192Q8TEP8 1941 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 DCTN6O00399 190 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 IL11P20809 199 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 ERP29P30040 261 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 AKR1C1Q04828 323 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FBXW12Q6X9E4 464 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM123Q8N131 208 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 MIOXQ9UGB7 285 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 A0A1W2PR80 420 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 ANGPTL7O43827 346 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 LALBAP00709 142 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FCER2P06734 321 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 OR8U8P0C7N1 319 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 PSMB1P20618 241 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FOXO1Q12778 655 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 LY6DQ14210 128 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 OXA1LQ15070 435 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 AKR1C8PQ5T2L2 129 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FAHD2BQ6P2I3 314 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 CXorf67Q86X51 503 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FAHD2AQ96GK7 314 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 YAE1D1Q9NRH1 226 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 LIN7CQ9NUP9 197 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 ING1Q9UK53 422 aaPredicted RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FXYD6-FXYD2A0A087WZ82 144 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 SMAD7O15105 426 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 ELK1P19419 428 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 GDNFP39905 211 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 RBMS2Q15434 407 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF774Q6NX45 483 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 SECTM1Q8WVN6 248 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 CHST5Q9GZS9 411 aa7.48□□□□□ -1.21
PDLIM5-201ENST00000317968 FXYD6Q9H0Q3 95 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms