RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 MLF2Q15773 248 aaPredicted RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR2T2Q6IF00 324 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 GATSQ8NAP1 163 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR10A7Q8NGE5 316 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR4A4PQ8NGN8 299 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 TRIB1Q96RU8 372 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SH2D2AQ9NP31 389 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ZDHHC8Q9ULC8 765 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ST3GAL6Q9Y274 331 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 RBFOX3A6NFN3 312 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 MPLP40238 635 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ST3GAL2Q16842 350 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF813Q6ZN06 617 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 HSD17B11Q8NBQ5 300 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR4D6Q8NGJ1 314 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 VSTM2LQ96N03 204 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 CLEC18AA5D8T8 446 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SULT1A1P50225 295 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 UCP3P55916 312 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SHEQ5VZ18 495 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 CLEC18CQ8NCF0 446 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SLC26A10Q8NG04 563 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SFXN3Q9BWM7 321 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 LINC00597Q9H2U6 94 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SEBOXQ9HB31 216 aaPredicted RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 A0A087WWC5 75 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 NME2P22392 152 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 EPHA8P29322 1005 aaPredicted RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 RNF133Q8WVZ7 376 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 TNFSF18Q9UNG2 199 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 DCTN6O00399 190 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 VENTXO95231 258 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 YBX1P67809 324 aaKnown RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SPEM1Q8N4L4 309 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 FAM210BQ96KR6 192 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ULBP3Q9BZM4 244 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 AMMECR1Q9Y4X0 333 aaPredicted RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SSSCA1O60232 199 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 MADCAM1Q13477 382 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 IER5LQ5T953 404 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 BTNL3Q6UXE8 466 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 GTF3AQ92664 365 aaKnown RBP7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SIGLEC11Q96RL6 698 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 NTNG1Q9Y2I2 539 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 IDSB3KWA1 339 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 IL20RBQ6UXL0 311 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF429Q86V71 674 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 SUMF1Q8NBK3 374 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 AKR7LQ8NHP1 331 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 PMCHL2Q9BQD1 86 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 GGACTQ9BVM4 153 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR5V1Q9UGF6 321 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 CORTO00230 105 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 PMCHL1Q16048 86 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF528Q3MIS6 628 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR4F5Q8NH21 305 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 CLDN23Q96B33 292 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 OR4F4Q96R69 305 aa7.88□□□□□ -1.15
COL6A5-202ENST00000312481 P2RY10O00398 339 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 AGPAT2O15120 278 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 SELENOTP62341 195 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 KISS1Q15726 138 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF718Q3SXZ3 478 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 GGNBP1Q5YKI7 109 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 GABRG3Q99928 467 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ANXA10Q9UJ72 324 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 LNP1A1A4G5 178 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 OR4C45A6NMZ5 311 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 TRDCB7Z8K6 153 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 C1orf100Q5SVJ3 147 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 Q8N9G6 341 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF511Q8NB15 262 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 NARFLQ9H6Q4 476 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 SIX6O95475 246 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 CRYABP02511 175 aaKnown RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF296Q8WUU4 475 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 TTTY10Q9BZA0 68 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 BET1LQ9NYM9 111 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ISLRO14498 428 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 FGF17O60258 216 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 F7P08709 466 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 EPHA1P21709 976 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 GDF1P27539 372 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 SRD5A2P31213 254 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 TSPAN7P41732 249 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ALG14Q96F25 216 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 IMMP2LQ96T52 175 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 A6NDN8 102 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF891A8MT65 544 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 TIMM8AO60220 97 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF121P58317 390 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 LCN2P80188 198 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 Q6ZPB1 254 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 SPPL3Q8TCT6 385 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms