RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SYNPRQ8TBG9 265 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 TOMM40LQ969M1 308 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 GPA33Q99795 319 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 VCX2Q9H322 139 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 KCNK7Q9Y2U2 307 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 CHST2Q9Y4C5 530 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 CLDN16Q9Y5I7 305 aa5.31□□□□□ -1.56
SEC22A-201ENST00000309934 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 FAM171A2A8MVW0 826 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PROB1E7EW31 1015 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 H7C1C5 153 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 MAS1P04201 325 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 MPGP29372 298 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 OPRM1P35372 400 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 HNRNPA3P51991 378 aaKnown RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LCN6P62502 163 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 P2RY6Q15077 328 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PABPC1L2AQ5JQF8 200 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 INO80CQ6PI98 192 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 OVCH2Q7RTZ1 564 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SULF2Q8IWU5 870 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LRRC18Q8N456 261 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 C1orf162Q8NEQ5 155 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 OR5M9Q8NGP3 310 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 THAP7Q9BT49 309 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 RTL8AQ9BWD3 113 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CALHM2Q9HA72 323 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 KLHL13Q9P2N7 655 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ELF5Q9UKW6 265 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LRP12Q9Y561 859 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 BSNQ9UPA5 3926 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ATG2BQ96BY7 2078 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 IGLV1-36A0A0B4J1U3 117 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF816-ZNF321PA0A0X1KG74 233 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LOC101059948A0A1B0GTJ6 334 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PDE6DO43924 150 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 MBPP02686 304 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CTXN2P0C2S0 81 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 EVX1P49640 407 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 FUT6P51993 359 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 RAG2P55895 527 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 GGNBP1Q5YKI7 109 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SLC38A9Q8NBW4 561 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ZPLD1Q8TCW7 415 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 FAM3DQ96BQ1 224 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 RAB39BQ96DA2 213 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SLC25A21Q9BQT8 299 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM208Q9BTX3 173 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 KCNJ16Q9NPI9 418 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SLCO1C1Q9NYB5 712 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 AK6Q9Y3D8 172 aaKnown RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CACNA1IQ9P0X4 2223 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 C2orf72A6NCS6 295 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM235A6NFC5 223 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 H0Y8G0 127 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 DHRS3O75911 302 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 YIF1AO95070 293 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ZFPL1O95159 310 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ABHD16AO95870 558 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PGA4P0DJD7 388 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PGA3P0DJD8 388 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 IRF2P14316 349 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ATF1P18846 271 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SHC1P29353 583 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 AGTR1P30556 359 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF93P35789 620 aaPredicted RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 GAS1P54826 345 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 RPS18P62269 152 aaKnown RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SSX1Q16384 188 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LRRC37A5PQ49AS3 106 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 LINC00596Q86U02 117 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF573Q86YE8 665 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CCDC71LQ8N9Z2 235 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 PIGTQ969N2 578 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CLUHP3Q96NS8 147 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 DERL3Q96Q80 235 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SYT3Q9BQG1 590 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 SLIRPQ9GZT3 109 aaKnown RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 CHST6Q9GZX3 395 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 C12orf49Q9H741 205 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM38BQ9NVV0 291 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 MED29Q9NX70 200 aa5.3□□□□□ -1.56
SEC22A-201ENST00000309934 MRPS28Q9Y2Q9 187 aaKnown RBP5.3□□□□□ -1.56
SEC22A-201ENST00000309934 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 DVL2O14641 736 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 THY1P04216 161 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 LPLP06858 475 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 HEXAP06865 529 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 MMP7P09237 267 aaPredicted RBP5.29□□□□□ -1.56
SEC22A-201ENST00000309934 CSF3P09919 207 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 SUCLG1P53597 346 aaKnown RBP5.29□□□□□ -1.56
SEC22A-201ENST00000309934 CYCSP99999 105 aaKnown RBP5.29□□□□□ -1.56
SEC22A-201ENST00000309934 IQCJQ1A5X6 159 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 CHRFAM7AQ494W8 412 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 APOOLQ6UXV4 268 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 STAC2Q6ZMT1 411 aa5.29□□□□□ -1.56
SEC22A-201ENST00000309934 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
SEC22A-201ENST00000309934 ANGPTL5Q86XS5 388 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms