RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PLSCR5A0PG75 271 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 LILRA1O75019 489 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 AGFG2O95081 481 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 ZNF14P17017 642 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 PRDX4Q13162 271 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 STARD4Q96DR4 205 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 RADILQ96JH8 1075 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 METTL9Q9H1A3 318 aa19.33■□□□□ 0.68
PDLIM2-202ENST00000308354 MPC2O95563 127 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 HLA-AP01891 365 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 CRYABP02511 175 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 NAT1P18440 290 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 ATP1B3P54709 279 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 DHODHQ02127 395 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 TBR1Q16650 682 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 CCDC120Q96HB5 630 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 DPCDQ9BVM2 203 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 TM2D1Q9BX74 207 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 FN3KRPQ9HA64 309 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 FAM215AQ9Y5M1 114 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 PRR14LQ5THK1 2151 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 IGF2RP11717 2491 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 CSTBP04080 98 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 GRK1Q15835 563 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 RPUSD3Q6P087 351 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 ZNF680Q8NEM1 530 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 ELMOD3Q96FG2 381 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 OCSTAMPQ9BR26 566 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 PECRQ9BY49 303 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 FGF23Q9GZV9 251 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 PLSCR4Q9NRQ2 329 aa19.32■□□□□ 0.68
PDLIM2-202ENST00000308354 K7ENP7 123 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 CXCL2P19875 107 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 CPT2P23786 658 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 TBC1D28Q2M2D7 210 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 INO80CQ6PI98 192 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 SLC25A42Q86VD7 318 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 ZDHHC22Q8N966 263 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 ST8SIA4Q92187 359 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 CPNE2Q96FN4 548 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 MBD3L4A6NDZ8 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 MBD3L3A6NE82 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 MBD3L5A6NJ08 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 CD300LBA8K4G0 201 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 SFTPBP07988 381 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 PDZK1IP1Q13113 114 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 MPPED2Q15777 294 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 TAF9Q16594 264 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 FAM180AQ6UWF9 173 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 C6orf201Q7Z4U5 140 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 CXorf67Q86X51 503 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 MBD3L2Q8NHZ7 208 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 ST6GALNAC5Q9BVH7 336 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 ZNF230Q9UIE0 474 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 PROCRQ9UNN8 238 aa19.31■□□□□ 0.68
PDLIM2-202ENST00000308354 GPM6AP51674 278 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 PPP1R1AQ13522 171 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 NKAPLQ5M9Q1 402 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 LY6G6FQ5SQ64 297 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 OR51F2Q8NH61 342 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 HPSE2Q8WWQ2 592 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 MAFIPQ8WZ33 124 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 Q96M66 194 aa19.3■□□□□ 0.68
PDLIM2-202ENST00000308354 PTPRQQ9UMZ3 2332 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 CGAP01215 116 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 COX5AP20674 150 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 ERVS71-1P61550 626 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 OR2T2Q6IF00 324 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 CISD2Q8N5K1 135 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 ADAD2Q8NCV1 583 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 MARCH1Q8TCQ1 289 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 TMPRSS13Q9BYE2 586 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 NOP16Q9Y3C1 178 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 CNOT4O95628 575 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 AMY2BP19961 511 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 NFYAP23511 347 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 ZBTB25P24278 435 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 CD34P28906 385 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 IGFBP7Q16270 282 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 PIGYQ3MUY2 71 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 SLC25A26Q70HW3 274 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 ZNF611Q8N823 705 aa19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 CLEC4MQ9H2X3 399 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-202ENST00000308354 ANKRD34BA5PLL1 514 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 CBX5P45973 191 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 PDCD1Q15116 288 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 VAX1Q5SQQ9 334 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 LYG2Q86SG7 212 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 HOGA1Q86XE5 327 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 ZDHHC23Q8IYP9 409 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 WDR31Q8NA23 367 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 CDH20Q9HBT6 801 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 SERPINE3A8MV23 424 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 M0R233 179 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 RRP8O43159 456 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 WDR1O75083 606 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 AKR1C4P17516 323 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 HOXC12P31275 282 aa19.28■□□□□ 0.68
PDLIM2-202ENST00000308354 NPBWR2P48146 333 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms