RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ARL6IP1Q15041 203 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 SULF2Q8IWU5 870 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 PARP12Q9H0J9 701 aaKnown RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 TAF9BQ9HBM6 251 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 CCDC187A0A096LP49 1063 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF98A6NK75 572 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 SGCEO43556 437 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 SCGB1D2O95969 90 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 LCATP04180 440 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 HKR1P10072 659 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 NR2C1P13056 603 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF708P17019 499 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 FKBP2P26885 142 aaKnown RBP13.17□□□□□ -0.3
CSDC2-201ENST00000306149 LPAR6P43657 344 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 HIST1H3AP68431 136 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 PPA1Q15181 289 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 RSU1Q15404 277 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 HIST2H3PS2Q5TEC6 136 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 TSPO2Q5TGU0 170 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 RTL6Q6ICC9 239 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 HIST2H3AQ71DI3 136 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 MRPL24Q96A35 216 aaKnown RBP13.17□□□□□ -0.3
CSDC2-201ENST00000306149 Q96M66 194 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 NAA11Q9BSU3 229 aaPredicted RBP13.17□□□□□ -0.3
CSDC2-201ENST00000306149 C1orf123Q9NWV4 160 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 AK3Q9UIJ7 227 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 FREM1Q5H8C1 2179 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 A0A087WZY1 265 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 SULT1A2P50226 295 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 RPS18P62269 152 aaKnown RBP13.17□□□□□ -0.3
CSDC2-201ENST00000306149 TMEM268Q5VZI3 342 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 REEP6Q96HR9 211 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 WDR54Q9H977 334 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 BIN3Q9NQY0 253 aa13.17□□□□□ -0.3
CSDC2-201ENST00000306149 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
CSDC2-201ENST00000306149 MED6O75586 246 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 VAMP5O95183 116 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 FXYD4P59646 89 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 NCKAP5O14513 1909 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF850A8MQ14 1090 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 RRP8O43159 456 aaKnown RBP13.16□□□□□ -0.3
CSDC2-201ENST00000306149 FARS2O95363 451 aaKnown RBP13.16□□□□□ -0.3
CSDC2-201ENST00000306149 CST4P01036 141 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 CD5P06127 495 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 AVPI1Q5T686 147 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 FAM27BQ5VT28 67 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 SKA3Q8IX90 412 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
CSDC2-201ENST00000306149 FGFBP3Q8TAT2 258 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 GLYATL2Q8WU03 294 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 HLA-CQ95604 372 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 SULT4A1Q9BR01 284 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 PARP11Q9NR21 331 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 PLA2G2EQ9NZK7 142 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 ANXA10Q9UJ72 324 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 NXT1Q9UKK6 140 aaKnown RBP13.16□□□□□ -0.3
CSDC2-201ENST00000306149 POMT1Q9Y6A1 747 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
CSDC2-201ENST00000306149 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 RNASEK-C17orf49H0YIS7 233 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 GAPDHP04406 335 aaKnown RBP13.15□□□□□ -0.3
CSDC2-201ENST00000306149 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 RFPL3SP0C7P2 107 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 RAC1P63000 192 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 NAT6Q93015 286 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 MARS2Q96GW9 593 aaKnown RBP13.15□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 PADI1Q9ULC6 663 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
CSDC2-201ENST00000306149 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 FCGR3AP08637 254 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF32P17041 273 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 CRYGSP22914 178 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 RPL35P42766 123 aaKnown RBP13.15□□□□□ -0.3
CSDC2-201ENST00000306149 PDZK1IP1Q13113 114 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 IL11RAQ14626 422 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 GGNBP1Q5YKI7 109 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 Q6ZSR3 168 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 SGPP2Q8IWX5 399 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 OR14L1PQ8NHC6 308 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 METTL9Q9H1A3 318 aa13.15□□□□□ -0.3
CSDC2-201ENST00000306149 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
CSDC2-201ENST00000306149 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.31
CSDC2-201ENST00000306149 CXCL13O43927 109 aa13.15□□□□□ -0.31
CSDC2-201ENST00000306149 IGKV1D-12P01611 117 aa13.15□□□□□ -0.31
CSDC2-201ENST00000306149 RPL12P30050 165 aaKnown RBP13.15□□□□□ -0.31
CSDC2-201ENST00000306149 AKR1D1P51857 326 aa13.15□□□□□ -0.31
CSDC2-201ENST00000306149 ZNF133P52736 654 aaPredicted RBP13.15□□□□□ -0.31
CSDC2-201ENST00000306149 PIGPP57054 158 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms