RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PDCD6O75340 191 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 NGFP01138 241 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 ZNF14P17017 642 aaPredicted RBP16.72■□□□□ 0.27
HOXC4-201ENST00000303406 PER3P56645 1201 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 RBM11P57052 281 aaKnown RBP16.72■□□□□ 0.27
HOXC4-201ENST00000303406 MRPL49Q13405 166 aaKnown RBP16.72■□□□□ 0.27
HOXC4-201ENST00000303406 IKZF1Q13422 519 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 PPP1R1AQ13522 171 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 CHRFAM7AQ494W8 412 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 NKAPLQ5M9Q1 402 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 C11orf88Q6PI97 169 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
HOXC4-201ENST00000303406 FBXL14Q8N1E6 418 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 LILRB4Q8NHJ6 448 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 HPSE2Q8WWQ2 592 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 PHB2Q99623 299 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 SHPKQ9UHJ6 478 aa16.72■□□□□ 0.27
HOXC4-201ENST00000303406 DUS4LO95620 317 aaKnown RBP16.71■□□□□ 0.27
HOXC4-201ENST00000303406 PLATP00750 562 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 CD8AP01732 235 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 SFTPBP07988 381 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 COX5AP20674 150 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 GMFBP60983 142 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 UBE2NP61088 152 aaKnown RBP16.71■□□□□ 0.27
HOXC4-201ENST00000303406 GABRA6Q16445 453 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 ACSF3Q4G176 576 aaPredicted RBP16.71■□□□□ 0.27
HOXC4-201ENST00000303406 LY6G6FQ5SQ64 297 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 LIN54Q6MZP7 749 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 C17orf107Q6ZR85 190 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 Q6ZS92 163 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 CALHM1Q8IU99 346 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 MKXQ8IYA7 352 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 OR13G1Q8NGZ3 307 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 MARCH1Q8TCQ1 289 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 HIST1H2AAQ96QV6 131 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 HEXA-AS1Q9H8Q6 139 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 AK3Q9UIJ7 227 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 ST3GAL6Q9Y274 331 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 NOP16Q9Y3C1 178 aaKnown RBP16.71■□□□□ 0.27
HOXC4-201ENST00000303406 RTTNQ86VV8 2226 aa16.71■□□□□ 0.27
HOXC4-201ENST00000303406 OR5B21A6NL26 309 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 ANKRD30BLA7E2S9 258 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 PPP3CBP16298 524 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF81P51508 661 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 IL13RA1P78552 427 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 FGL1Q08830 312 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 HLXQ14774 488 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 TMEM128Q5BJH2 165 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 FBXW12Q6X9E4 464 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 SLC25A26Q70HW3 274 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 OR10AD1Q8NGE0 317 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 DHRS9Q9BPW9 319 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 CMSS1Q9BQ75 279 aaKnown RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 FGF23Q9GZV9 251 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 EHFQ9NZC4 300 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 SLC23A1Q9UHI7 598 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 EP300Q09472 2414 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 GEMIN2O14893 280 aaKnown RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 TOXO94900 526 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 SIX6O95475 246 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 KIR2DL2P43627 348 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 AADACL3Q5VUY0 350 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 DCAF12L2Q5VW00 463 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 RFPL4BQ6ZWI9 263 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 SLC7A5P1Q8MH63 180 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 C9orf106Q8NAJ2 232 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 OR5P3Q8WZ94 311 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 FAAP24Q9BTP7 215 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 C5orf66Q9H5L9 145 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 RHOFQ9HBH0 211 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF701Q9NV72 531 aaPredicted RBP16.7■□□□□ 0.26
HOXC4-201ENST00000303406 ANXA10Q9UJ72 324 aa16.7■□□□□ 0.26
HOXC4-201ENST00000303406 MED12LQ86YW9 2145 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 RFPL4AA6NLU0 287 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 MCRIP1C9JLW8 97 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 RFPL4AL1F8VTS6 287 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 FCGR3AP08637 254 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 FUT3P21217 361 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 NFYAP23511 347 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-201ENST00000303406 FGF12P61328 243 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 SEC61A1P61619 476 aaKnown RBP16.69■□□□□ 0.26
HOXC4-201ENST00000303406 PIGYQ3MUY2 71 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 TMEM211Q6ICI0 200 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 TEX261Q6UWH6 196 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 LINC00596Q86U02 117 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 ADAD2Q8NCV1 583 aaKnown RBP16.69■□□□□ 0.26
HOXC4-201ENST00000303406 SULT4A1Q9BR01 284 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 CLEC4MQ9H2X3 399 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-201ENST00000303406 PLK3Q9H4B4 646 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 PLSCR4Q9NRQ2 329 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 DECR2Q9NUI1 292 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF230Q9UIE0 474 aaPredicted RBP16.69■□□□□ 0.26
HOXC4-201ENST00000303406 LHX6Q9UPM6 363 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 U3KQ87 197 aa16.69■□□□□ 0.26
HOXC4-201ENST00000303406 DBX1A6NMT0 343 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 ZNF732B4DXR9 585 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 CRHP06850 196 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 CBR1P16152 277 aa16.68■□□□□ 0.26
HOXC4-201ENST00000303406 ARPC4P59998 168 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms