RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RD3LP0DJH9 198 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 KIRREL2Q6UWL6 708 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 OR2T10Q8NGZ9 312 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 OR2V1Q8NHB1 315 aa6.84□□□□□ -1.31
SF3B3-201ENST00000302516 ZNF775Q96BV0 537 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 AMMECR1Q9Y4X0 333 aaPredicted RBP6.84□□□□□ -1.31
SF3B3-201ENST00000302516 GREB1Q4ZG55 1949 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 SEMA7AO75326 666 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 ZFPL1O95159 310 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 EDN3P14138 238 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM267Q0VDI3 215 aaPredicted RBP6.84□□□□□ -1.32
SF3B3-201ENST00000302516 KISS1Q15726 138 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 KHDC3LQ587J8 217 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 OR1N1Q8NGS0 311 aa6.84□□□□□ -1.32
SF3B3-201ENST00000302516 OR5B21A6NL26 309 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 M0QZ24 198 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 CD99P14209 185 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 CDC34P49427 236 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 DLK1P80370 383 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 G3V3Y1 287 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 IGHA1P01876 353 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PCBP3P57721 371 aaKnown RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 RAE1P78406 368 aaKnown RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF766Q5HY98 468 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 LHFPL5Q8TAF8 219 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ROBO4Q8WZ75 1007 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ADIPOR1Q96A54 375 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PARP11Q9NR21 331 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 OR5V1Q9UGF6 321 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 DOCK4Q8N1I0 1966 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 NKX2-2O95096 273 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 NHLH1Q02575 133 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 NHLH2Q02577 135 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 FBXL6Q8N531 539 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ARHGAP5-AS1Q96IT6 56 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 FOXO1Q12778 655 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 MYBPHQ13203 477 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 AGERQ15109 404 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 WDR38Q5JTN6 314 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PRR27Q6MZM9 219 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 OLIG3Q7RTU3 272 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 OR10A7Q8NGE5 316 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF707Q96C28 371 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 GAL3ST2Q9H3Q3 398 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 SIRT3Q9NTG7 399 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PITPNC1Q9UKF7 332 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 V9GYH0 126 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 DOCK3Q8IZD9 2030 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 CRYAAP02489 173 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 FAM3AP98173 230 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF141Q15928 474 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 AWAT1Q58HT5 328 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 DHRS11Q6UWP2 260 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 Q6ZN92 141 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 OVCH2Q7RTZ1 564 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 SLC25A42Q86VD7 318 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 C4orf45Q96LM5 186 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 MAP1LC3CQ9BXW4 147 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM191AQ9H0A3 160 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 STARD10Q9Y365 291 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 SVILO95425 2214 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 M0R1X1 148 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PGA4P0DJD7 388 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PGA5P0DJD9 388 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PPIAP62937 165 aaKnown RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 LRP11Q86VZ4 500 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 DPF1Q92782 380 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ATRXP46100 2492 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 FCMRO60667 390 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ZGLP1P0C6A0 271 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PI3P19957 117 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 RGS7BPQ6MZT1 257 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 WBP2Q969T9 261 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 PDCD6O75340 191 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ZNF816Q0VGE8 651 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 ISXQ2M1V0 245 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 CNRIP1Q96F85 164 aaPredicted RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 RHNO1Q9BSD3 238 aa6.83□□□□□ -1.32
SF3B3-201ENST00000302516 MBNL1Q9NR56 388 aaKnown RBP6.83□□□□□ -1.32
SF3B3-201ENST00000302516 OR2M5A3KFT3 312 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 RPS4Y1P22090 263 aaKnown RBP6.82□□□□□ -1.32
SF3B3-201ENST00000302516 AVPR2P30518 371 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 GALNSP34059 522 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 KCNAB1Q14722 419 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 Q3ZCU0 254 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 TMEM215Q68D42 235 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 ANKRD33Q7Z3H0 272 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 OR1L1Q8NH94 360 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 PTX4Q96A99 478 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 FBXL17Q9UF56 701 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 NEU3Q9UQ49 428 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 ISLRO14498 428 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 DHHO43323 396 aa6.82□□□□□ -1.32
SF3B3-201ENST00000302516 IL2RAP01589 272 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms