RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 UNC119Q13432 240 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 DEFB113Q30KQ7 82 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 C2orf76Q3KRA6 126 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 HES5Q5TA89 166 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 GLT8D1Q68CQ7 371 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 ELP2Q6IA86 826 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR10K2Q6IF99 312 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 GLIPR1L1Q6UWM5 242 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 USP43Q70EL4 1123 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 ZNF525Q8N782 197 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 C19orf18Q8NEA5 215 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR51D1Q8NGF3 324 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR6M1Q8NGM8 313 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR10K1Q8NGX5 313 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR10Z1Q8NGY1 313 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR51F2Q8NH61 342 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 TBC1D15Q8TC07 691 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 LRRC29Q8WV35 223 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 TNFAIP8L1Q8WVP5 186 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 CCL17Q92583 94 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 SLAMF9Q96A28 289 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 FOXRED1Q96CU9 486 aaPredicted RBP7.96□□□□□ -1.14
RFX3-201ENST00000302303 SLIRPQ9GZT3 109 aaKnown RBP7.96□□□□□ -1.14
RFX3-201ENST00000302303 EGLN1Q9GZT9 426 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 CXorf56Q9H5V9 222 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 FN3KRPQ9HA64 309 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 BATF3Q9NR55 127 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 RBFOX1Q9NWB1 397 aaKnown RBP7.96□□□□□ -1.14
RFX3-201ENST00000302303 IL36GQ9NZH8 169 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 OR5V1Q9UGF6 321 aa7.96□□□□□ -1.14
RFX3-201ENST00000302303 MRPS28Q9Y2Q9 187 aaKnown RBP7.96□□□□□ -1.14
RFX3-201ENST00000302303 A6NLC8 198 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 PDCD5O14737 125 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 MAGEB3O15480 346 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 ZNF205O95201 554 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 TFF1P04155 84 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 TMEM225BP0DP42 221 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 PSMD7P51665 324 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 EFNB2P52799 333 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 MZT1Q08AG7 82 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 P2RY14Q15391 338 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 TEX36Q5VZQ5 186 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 METAP1DQ6UB28 335 aaPredicted RBP7.95□□□□□ -1.14
RFX3-201ENST00000302303 OR5H6Q8NGV6 325 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 NINJ1Q92982 152 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 FAM3DQ96BQ1 224 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 PERPQ96FX8 193 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 GPER1Q99527 375 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 HMG20AQ9NP66 347 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 BEX4Q9NWD9 120 aaPredicted RBP7.95□□□□□ -1.14
RFX3-201ENST00000302303 RNF7Q9UBF6 113 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 FBLN5Q9UBX5 448 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 STEAP1Q9UHE8 339 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 DAPK2Q9UIK4 370 aa7.95□□□□□ -1.14
RFX3-201ENST00000302303 A0A0A6YYD4 124 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 TMEM272A0A1B0GTI8 110 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 VWC2LB2RUY7 222 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 TPD52L2O43399 206 aaKnown RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 SSX4O60224 188 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 FSTL3O95633 263 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 IGHV2-70P01814 119 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 OCMP0CE72 109 aaPredicted RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 GIFP27352 417 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 ATP5J2P56134 94 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 ZMYND11Q15326 602 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 SFRP4Q6FHJ7 346 aaPredicted RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 ACP7Q6ZNF0 438 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 RTN4RL2Q86UN3 420 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 FAM90A1Q86YD7 464 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 MKXQ8IYA7 352 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 LRRC75A-AS1Q8N1F1 130 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 OR51T1Q8NGJ9 327 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 ZNF671Q8TAW3 534 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 CEP19Q96LK0 163 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 NXF2Q9GZY0 626 aaKnown RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 LIN7BQ9HAP6 207 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 TMEM165Q9HC07 324 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 SMURF1Q9HCE7 757 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 DLL4Q9NR61 685 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 ZNF222Q9UK12 451 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 ING4Q9UNL4 249 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 NAV2Q8IVL1 2488 aa7.94□□□□□ -1.14
RFX3-201ENST00000302303 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
RFX3-201ENST00000302303 FLNBO75369 2602 aaKnown RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 IGKV1D-17A0A075B6S4 117 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 IGHV3OR15-7A0A075B7D8 119 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 A0A096LNT2 108 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CCDC160A6NGH7 325 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 FOXI3A8MTJ6 420 aaPredicted RBP7.93□□□□□ -1.14
RFX3-201ENST00000302303 PSG2P11465 335 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DNASE1P24855 282 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 CD80P33681 288 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 TMEM33P57088 247 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 FGF12P61328 243 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 RAB11BQ15907 218 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 DGUOKQ16854 277 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 HFEQ30201 348 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 SLC22A6Q4U2R8 563 aa7.93□□□□□ -1.14
RFX3-201ENST00000302303 IDNKQ5T6J7 187 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms