RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 ST8SIA3O43173 380 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 IGHMP01871 453 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 SPSB3Q6PJ21 355 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 YAF2Q8IY57 180 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 OR2AJ1Q8NGZ0 328 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 RTN4IP1Q8WWV3 396 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 HIST1H2BLQ99880 126 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 C5orf63A6NC05 138 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 FRG2CA6NGY1 282 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF705GA8MUZ8 300 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 H3BML4 177 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 CYTIPO60759 359 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 OR1D4P47884 311 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 DAP3P51398 398 aaKnown RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 KISS1Q15726 138 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 MEX3BQ6ZN04 569 aaKnown RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 GRINAQ7Z429 371 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF283Q8N7M2 679 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 PLA2G2FQ9BZM2 168 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 SLC7A11Q9UPY5 501 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 SHISA8B8ZZ34 492 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 FTCDNL1E5RQL4 147 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 RER1O15258 196 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF17P17021 662 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 GLIPR1P48060 266 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 EWSR1Q01844 656 aaKnown RBP eCLIP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 HHEXQ03014 270 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 FZD2Q14332 565 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 M1APQ8TC57 530 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 TWSG1Q9GZX9 223 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 PHF3Q92576 2039 aaKnown RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 SCAF4O95104 1147 aaKnown RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ONECUT2O95948 504 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF728P0DKX0 622 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM187Q14656 261 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 GNMTQ14749 295 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM196Q5HYL7 178 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 GPBAR1Q8TDU6 330 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 PIGTQ969N2 578 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ADIPOR1Q96A54 375 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 VDAC3Q9Y277 283 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ASCC3Q8N3C0 2202 aaKnown RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 A0A087WWC5 75 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ALG1L2C9J202 215 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ADAM10O14672 748 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 DBHP09172 617 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 FCGR2AP12318 317 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 COL9A1P20849 921 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 RPL23AP62750 156 aaKnown RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 MFAP5Q13361 173 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 ICAM4Q14773 271 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 FAM189A2Q15884 450 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 Q6ZSR6 202 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 H1FNTQ75WM6 255 aaPredicted RBP11.41□□□□□ -0.58
TVP23A-201ENST00000299866 NAA60Q9H7X0 242 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 UCK1Q9HA47 277 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 LHFPL6Q9Y693 200 aa11.41□□□□□ -0.58
TVP23A-201ENST00000299866 MYO7BQ6PIF6 2116 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 FAM221AA4D161 298 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 DUSP1P28562 367 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 CSNK1A1P48729 337 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 BRICD5Q6PL45 260 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM123Q8N131 208 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 FAM89BQ8N5H3 189 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 OR11L1Q8NGX0 322 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 HAS2Q92819 552 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 MAGT1Q9H0U3 335 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 SOHLH2Q9NX45 425 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 CCDC187A0A096LP49 1063 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 A0A1B0GW64 132 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 B4DGG1 531 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 APLNRP35414 380 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 RUNX1Q01196 453 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 SLC22A25Q6T423 547 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 C16orf47Q6ZP98 133 aaPredicted RBP11.4□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM217Q8N7C4 229 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 FAAP24Q9BTP7 215 aa11.4□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM150CB9EJG8 249 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 PHF1O43189 567 aaPredicted RBP11.39□□□□□ -0.59
TVP23A-201ENST00000299866 C20orf196Q8IYI0 205 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 C1orf87Q8N0U7 546 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 SLC38A9Q8NBW4 561 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 PLPP5Q8NEB5 264 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 OR14L1PQ8NHC6 308 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 DYRK2Q92630 601 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 SIRT7Q9NRC8 400 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 DCAF16Q9NXF7 216 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF581Q9P0T4 197 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 TDRD6O60522 2096 aaKnown RBP11.39□□□□□ -0.59
TVP23A-201ENST00000299866 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 FAM230AA0A1W2PPH8 454 aa11.39□□□□□ -0.59
TVP23A-201ENST00000299866 SERPINE3A8MV23 424 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms