RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 OR1L6Q8NGR2 347 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 TTC9Q92623 222 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 DOK5Q9P104 306 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 STAG3L3P0CL85 134 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 FAM78AQ5JUQ0 283 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 FBXL14Q8N1E6 418 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 NTMQ9P121 344 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 PRSS50Q9UI38 385 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 C5P01031 1676 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 FUT6P51993 359 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 ARF6P62330 175 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 KIRREL2Q6UWL6 708 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 NUFIP2Q7Z417 695 aaKnown RBP13.31□□□□□ -0.28
SCN3B-201ENST00000299333 TWSG1Q9GZX9 223 aa13.31□□□□□ -0.28
SCN3B-201ENST00000299333 KLK8O60259 260 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 B4GALT1P15291 398 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 HIST1H1DP16402 221 aaKnown RBP13.3□□□□□ -0.28
SCN3B-201ENST00000299333 BSGP35613 385 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 OR1D5P58170 312 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 BTG2P78543 158 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 SKP2Q13309 424 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 ANAPC16Q96DE5 110 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 ST8SIA5O15466 376 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 ADAP1O75689 374 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 CYC1P08574 325 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 DEFB103AP81534 67 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 IL13RA2Q14627 380 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 LYPD8Q6UX82 237 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 SH2D5Q6ZV89 423 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 TRILQ7L0X0 811 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 C16orf52Q8NHV5 167 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
SCN3B-201ENST00000299333 SLC17A5Q9NRA2 495 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 PRR13Q9NZ81 148 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 IGLV3-10A0A075B6K4 115 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 FUT3P21217 361 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 TCTAP57738 103 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM178AQ8NBL3 297 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 OTOSQ8NHW6 89 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 RGP1Q92546 391 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-201ENST00000299333 RAB24Q969Q5 203 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 LINC00862A6NCI5 91 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 CDK2AP1O14519 115 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 CA2P00918 260 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 OR5AC1P0C628 307 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 BCL3P20749 454 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 THBS4P35443 961 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 PTGFRP43088 359 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM52BQ4KMG9 183 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM210A6NLX4 147 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 CYB5R3P00387 301 aaPredicted RBP13.3□□□□□ -0.28
SCN3B-201ENST00000299333 WDR38Q5JTN6 314 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 Q7L0L9 218 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 RPS19BP1Q86WX3 136 aaKnown RBP13.3□□□□□ -0.28
SCN3B-201ENST00000299333 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
SCN3B-201ENST00000299333 PLPP2O43688 288 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 OPRK1P41145 380 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 TAS2R60P59551 318 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 EXT1Q16394 746 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-201ENST00000299333 ZNF628Q5EBL2 1059 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 TRAT1Q6PIZ9 186 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 SLC6A13Q9NSD5 602 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 FOXJ2Q9P0K8 574 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 CACNG5Q9UF02 275 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 ANKRD20A5PA0PJZ0 165 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 CXCL12P48061 93 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 DYNLT3P51808 116 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 ADAMTS17Q8TE56 1095 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 CD40P25942 277 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 LPAR6P43657 344 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 PPICP45877 212 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 ACVR1Q04771 509 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 LGALSLQ3ZCW2 172 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-201ENST00000299333 C10orf126Q8N4M7 172 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 TP53I13Q8NBR0 393 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-201ENST00000299333 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 ERRFI1Q9UJM3 462 aaPredicted RBP13.29□□□□□ -0.28
SCN3B-201ENST00000299333 A0A0B4J293 547 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 A0A1W2PN81 502 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 H3BMH7 237 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 PCMT1P22061 227 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 LSM11P83369 360 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN3B-201ENST00000299333 CALHM3Q86XJ0 350 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 FAHD2AQ96GK7 314 aa13.29□□□□□ -0.28
SCN3B-201ENST00000299333 GCSHP23434 173 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 CEACAM6P40199 344 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 VWA2Q5GFL6 755 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 OR13H1Q8NG92 308 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 OR4F17Q8NGA8 305 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 IDSB3KWA1 339 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TNFSF11O14788 317 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 CCL11P51671 97 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 RHOBP62745 196 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 PPIAP62937 165 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms