RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ZNF175Q9Y473 711 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 A0A0U1RQV5 110 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 SPINK2P20155 84 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 RHBDD1Q8TEB9 315 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 PP6455Q8WZ26 134 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 MEMO1Q9Y316 297 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 IGHV3-9P01782 118 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 UMODP07911 640 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 CTSSP25774 331 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 PPT1P50897 306 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 DHRS11Q6UWP2 260 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 IL34Q6ZMJ4 242 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 RAB11FIP2Q7L804 512 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 SLC16A14Q7RTX9 510 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 SPEM1Q8N4L4 309 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 PRRX2Q99811 253 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 AMDHD2Q9Y303 409 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 TOX3O15405 576 aaPredicted RBP21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 H2AFB1P0C5Y9 115 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 GPHA2Q96T91 129 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 C20orf24Q9BUV8 137 aa21.23■□□□□ 0.99
SPTSSA-201ENST00000298130 CCDC187A0A096LP49 1063 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 MEX3AA1L020 520 aaKnown RBP21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 ADH6P28332 368 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 FAM189A2Q15884 450 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 C10orf128Q5T292 105 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 TDHQ8IZJ6 230 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 FGFBP3Q8TAT2 258 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 DNAJB11Q9UBS4 358 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 RFNGQ9Y644 331 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 FAM186AA6NE01 2351 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 IGKV1-12A0A0C4DH73 117 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 K7ESF4 209 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 SGCEO43556 437 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 DEDDO75618 318 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 IGKV1D-12P01611 117 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 LIFP15018 202 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 CXCL12P48061 93 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 MAML2Q8IZL2 1156 aaPredicted RBP21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 GHRLQ9UBU3 117 aa21.22■□□□□ 0.99
SPTSSA-201ENST00000298130 MBPP02686 304 aaPredicted RBP21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 ALDH3B1P43353 468 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 RAB13P51153 203 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 ZNF616Q08AN1 781 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 SPTSSAQ969W0 71 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 ZFP57Q9NU63 452 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 CRYM-AS1A6NIL9 109 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 SLC33A1O00400 549 aaPredicted RBP21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 F2RL1P55085 397 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 SMCO1Q147U7 214 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 ZNF528Q3MIS6 628 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 TMEM268Q5VZI3 342 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 SLC22A25Q6T423 547 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 METTL9Q9H1A3 318 aa21.21■□□□□ 0.99
SPTSSA-201ENST00000298130 IFNA21P01568 189 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 FCGR3AP08637 254 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 DAOP14920 347 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 FAM76BQ5HYJ3 339 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 FBXL14Q8N1E6 418 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 OR52M1Q8NGK5 317 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 RTN4IP1Q8WWV3 396 aaPredicted RBP21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 WNT16Q9UBV4 365 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 IGHV1-45A0A0A0MS14 117 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 OTX1P32242 354 aaPredicted RBP21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 HLA-BQ31612 363 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 ABCA11PQ4W5N1 156 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 BTNL8Q6UX41 500 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 WFDC1Q9HC57 220 aa21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 FOXD3Q9UJU5 478 aaPredicted RBP21.2■□□□□ 0.98
SPTSSA-201ENST00000298130 LOC102725191A0A1B0GVB3 256 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 CST4P01036 141 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 CTSDP07339 412 aaPredicted RBP21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF728P0DKX0 622 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF32P17041 273 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 SULT1A2P50226 295 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 SAP25Q8TEE9 199 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 SH3BGRL3Q9H299 93 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 RFC3P40938 356 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF84P51523 738 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF239Q16600 458 aaKnown RBP21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 OR10AD1Q8NGE0 317 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 HS3ST3B1Q9Y662 390 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 COX6A1P12074 109 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 RPS18P62269 152 aaKnown RBP21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 SWI5Q1ZZU3 235 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 MEX3BQ6ZN04 569 aaKnown RBP21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 SAT2Q96F10 170 aaPredicted RBP21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 BORCS8Q96FH0 119 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 KIRREL1Q96J84 757 aa21.19■□□□□ 0.98
SPTSSA-201ENST00000298130 ZNF98A6NK75 572 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 NHLH2Q02577 135 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 PEA15Q15121 130 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 HSD17B11Q8NBQ5 300 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 CLCC1Q96S66 551 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 HTR5AP47898 357 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 SURF2Q15527 256 aaPredicted RBP21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 MIDNQ504T8 468 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 SHEQ5VZ18 495 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 ISOC2Q96AB3 205 aa21.18■□□□□ 0.98
SPTSSA-201ENST00000298130 C12orf57Q99622 126 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms