RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TSPAN2O60636 221 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 FAM122CQ6P4D5 195 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 DGAT2L6Q6ZPD8 337 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 SKA3Q8IX90 412 aa15.64■□□□□ 0.09
CDC42EP3-201ENST00000295324 AKR7A2O43488 359 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 IFI6P09912 130 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 DCTDP32321 178 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 C17orf107Q6ZR85 190 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 ARHGAP5-AS1Q96IT6 56 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 IL17BQ9UHF5 180 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 E5RGE8 158 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 PNPP00491 289 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR4E1P0C645 316 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZNF705AQ6ZN79 300 aaPredicted RBP15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 PLEKHA2Q9HB19 425 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR5V1Q9UGF6 321 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 NSG2Q9Y328 171 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 RBBP6Q7Z6E9 1792 aaKnown RBP15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 SSSCA1O60232 199 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 PSMB6P28072 239 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 TGFBR1P36897 503 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 CHRNA10Q9GZZ6 450 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 SCN3AQ9NY46 2000 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 ACKR3P25106 362 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 AVPI1Q5T686 147 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 C15orf54Q8N8G6 183 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 TMEM105Q8N8V8 129 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 MRM2Q9UI43 246 aaKnown RBP15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 RNF24Q9Y225 148 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 CSAG2Q9Y5P2 127 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 BMI1P35226 326 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 MMP15P51511 669 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 FAAP20Q6NZ36 180 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR4C16Q8NGL9 310 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 MOB3AQ96BX8 217 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 TINAGQ9UJW2 476 aa15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 CNOT1A5YKK6 2376 aaKnown RBP15.63■□□□□ 0.09
CDC42EP3-201ENST00000295324 FFAR1O14842 300 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 JTBO76095 146 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 MGST1P10620 155 aaKnown RBP15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 TIPARPQ7Z3E1 657 aaKnown RBP15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR10AD1Q8NGE0 317 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 UBALD1Q8TB05 177 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 EP300Q09472 2414 aaPredicted RBP15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 BRS3P32247 399 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 CLDN20P56880 219 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 FOXO1Q12778 655 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 TAF9BQ9HBM6 251 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 TMPRSS2O15393 492 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 ACAA2P42765 397 aaKnown RBP15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 LYG2Q86SG7 212 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 PSENENQ9NZ42 101 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 PSG11Q9UQ72 335 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 SOHLH1Q5JUK2 328 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 C20orf196Q8IYI0 205 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR52N4Q8NGI2 321 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 BTF3L4Q96K17 158 aa15.62■□□□□ 0.09
CDC42EP3-201ENST00000295324 SNRPGP15A8MWD9 76 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 IAPPP10997 89 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 UBE2G1P62253 170 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 TSPO2Q5TGU0 170 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 MOGAT3Q86VF5 341 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 SFT2D1Q8WV19 159 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 C2orf50Q96LR7 162 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 KLK11Q9UBX7 282 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 TRAPPC2P0DI81 140 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 TRAPPC2BP0DI82 140 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 CT45A10P0DMU9 189 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 PLA1AQ53H76 456 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 C19orf48Q6RUI8 117 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 ERGIC1Q969X5 290 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 PURGQ9UJV8 347 aaKnown RBP15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 IGKV1D-16P01601 117 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 ASCL5Q7RTU5 278 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 LFNGQ8NES3 379 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 SLC25A40Q8TBP6 338 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 VWCEQ96DN2 955 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZNF385AQ96PM9 386 aaKnown RBP15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 FAAP24Q9BTP7 215 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 ADAM19Q9H013 955 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 PRR19A6NJB7 356 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 COX6A1P12074 109 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 PCMT1P22061 227 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 CALCRP30988 508 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 SNRPNP63162 240 aaKnown RBP15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 TMEM128Q5BJH2 165 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 WNT2BQ93097 391 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 TPPP3Q9BW30 176 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 NMES1Q9C002 83 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR2F2O95006 317 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 ZP4Q12836 540 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR2F1Q13607 317 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 SMCO4Q9NRQ5 59 aa15.61■□□□□ 0.09
CDC42EP3-201ENST00000295324 GREB1LQ9C091 1923 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 SH2D7A6NKC9 451 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 OR3A4PP47883 348 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 MDP1Q86V88 176 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 SULT1A3P0DMM9 295 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 SULT1A4P0DMN0 295 aa15.6■□□□□ 0.09
CDC42EP3-201ENST00000295324 COL19A1Q14993 1142 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms