RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF488Q96MN9 340 aa22.4■■□□□ 1.18
SSU72-201ENST00000291386 OR14A2Q96R54 314 aa22.4■■□□□ 1.18
SSU72-201ENST00000291386 CLN8Q9UBY8 286 aa22.4■■□□□ 1.18
SSU72-201ENST00000291386 FN1P02751 2386 aaKnown RBP22.39■■□□□ 1.18
SSU72-201ENST00000291386 OR2AT4A6NND4 320 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 MAPK3P27361 379 aaPredicted RBP22.39■■□□□ 1.17
SSU72-201ENST00000291386 GMFBP60983 142 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 EMX1Q04741 257 aaPredicted RBP22.39■■□□□ 1.17
SSU72-201ENST00000291386 PDZK1IP1Q13113 114 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 C11orf91Q3C1V1 193 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 UNQ9370/PRO34162Q6UXP9 181 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 ZNF788Q6ZQV5 615 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 SLC36A1Q7Z2H8 476 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 SVOPQ8N4V2 548 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 OR51A2Q8NGJ7 313 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 CPNE2Q96FN4 548 aaPredicted RBP22.39■■□□□ 1.17
SSU72-201ENST00000291386 CEP19Q96LK0 163 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 DERL3Q96Q80 235 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 MGLLQ99685 303 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 SNTG1Q9NSN8 517 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 ZNF222Q9UK12 451 aa22.39■■□□□ 1.17
SSU72-201ENST00000291386 ARHGAP32A7KAX9 2087 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 TMPRSS2O15393 492 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 MAGEB3O15480 346 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 HCKP08631 526 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 PSG2P11465 335 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 CPEP16870 476 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 KISS1Q15726 138 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 Q8IYB0 196 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 SAXO1Q8IYX7 474 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 OR5T2Q8NGG2 359 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 CCL13Q99616 98 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 TMEM138Q9NPI0 162 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 FOXJ3Q9UPW0 622 aa22.38■■□□□ 1.17
SSU72-201ENST00000291386 SONP18583 2426 aaKnown RBP22.38■■□□□ 1.17
SSU72-201ENST00000291386 PHF1O43189 567 aaPredicted RBP22.37■■□□□ 1.17
SSU72-201ENST00000291386 SC5DO75845 299 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 NXPH2O95156 264 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 CYB5AP00167 134 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 HSMCR30P0CW71 290 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 POU3F4P49335 361 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 ZP1P60852 638 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 PPP3R1P63098 170 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 PAX2Q02962 417 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 KCTD21Q4G0X4 260 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 LIPKQ5VXJ0 399 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 RNF144BQ7Z419 303 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 SPARTQ8N0X7 666 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 ZSCAN4Q8NAM6 433 aaPredicted RBP22.37■■□□□ 1.17
SSU72-201ENST00000291386 SLAMF9Q96A28 289 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 SPACA5Q96QH8 159 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 RHOFQ9HBH0 211 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 CKLFQ9UBR5 152 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 OR5V1Q9UGF6 321 aa22.37■■□□□ 1.17
SSU72-201ENST00000291386 IGKV1D-17A0A075B6S4 117 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 A0A0G2JMP0 313 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 A0A0X1KG70 313 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 TRAPPC2LH3BP13 241 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 PIN1P1O15428 100 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 PLATP00750 562 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 BDKRB2P30411 391 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 TGFBR2P37173 567 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 TRAM1Q15629 374 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 CR1LQ2VPA4 569 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 OR4M2Q8NGB6 313 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 DACT3Q96B18 629 aaPredicted RBP22.36■■□□□ 1.17
SSU72-201ENST00000291386 SDSLQ96GA7 329 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 MED30Q96HR3 178 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 GAFA1Q96PS6 74 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 LPAR3Q9UBY5 353 aa22.36■■□□□ 1.17
SSU72-201ENST00000291386 NKX6-3A6NJ46 265 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 J3QLI3 93 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 DVL1O14640 695 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 SIGLEC5O15389 551 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 SPRY1O43609 319 aaPredicted RBP22.35■■□□□ 1.17
SSU72-201ENST00000291386 FCN3O75636 299 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 KNG1P01042 644 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 ACSM3Q53FZ2 586 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 UBE2UQ5VVX9 321 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 ZNF773Q6PK81 442 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 PHC2Q8IXK0 858 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 OR52N4Q8NGI2 321 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 RFT1Q96AA3 541 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 ORAI1Q96D31 301 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 TMED9Q9BVK6 235 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 SEBOXQ9HB31 216 aaPredicted RBP22.35■■□□□ 1.17
SSU72-201ENST00000291386 SMURF1Q9HCE7 757 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 MMP26Q9NRE1 261 aa22.35■■□□□ 1.17
SSU72-201ENST00000291386 WNK2Q9Y3S1 2297 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 IGKV1-12A0A0C4DH73 117 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 F8VVB4 439 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 F8VWA3 439 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 GPR37O15354 613 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 CRLF1O75462 422 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 KDM4BO94953 1096 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 IGKV1D-12P01611 117 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 PSMA1P25786 263 aaKnown RBP22.34■■□□□ 1.17
SSU72-201ENST00000291386 IL13RA1P78552 427 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 FAM120AOSQ5T036 256 aa22.34■■□□□ 1.17
SSU72-201ENST00000291386 DCAF12L2Q5VW00 463 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms