RNA–Protein interactions for RNA: ENST00000286628.13

KCNMA1-202, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-202ENST00000286628 LIMK1P53667 647 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 OR5M8Q8NGP6 311 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 RPEQ96AT9 228 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 PRSS23O95084 383 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 ETFDHQ16134 617 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 ASB10Q8WXI3 467 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
KCNMA1-202ENST00000286628 ACSM4P0C7M7 580 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CCL2P13500 99 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 RAG2P55895 527 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 PPIHO43447 177 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 ACTL6AO96019 429 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 LRRTM1Q86UE6 522 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 TRBV5-3A0A0A0MS03 114 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 LY86O95711 162 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 WNT1P04628 370 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 AKR1C3P42330 323 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 OR5D13Q8NGL4 314 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 OR51I2Q9H344 312 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CNTD2Q9H8S5 307 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 RYDENQ9NUL5 291 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 MRM2Q9UI43 246 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 PSG11Q9UQ72 335 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 OR3A4PP47883 348 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 RAB7AP51149 207 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 OR2B8PP59922 312 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 PIK3IP1Q96FE7 263 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 RASL12Q9NYN1 266 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 TCRBV16S1A1N1A0A5B0 115 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 hADV38S2A0JD32 116 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 TRIM77I1YAP6 450 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 OR13D1Q8NGV5 346 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 CHRDL1Q9BU40 450 aa13.1□□□□□ -0.31
KCNMA1-202ENST00000286628 TUBAL3A6NHL2 446 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 FCGR3BO75015 233 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 GNG10P50151 68 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 SKP2Q13309 424 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 ZNF770Q6IQ21 691 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 ZNF318Q5VUA4 2279 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 DHRS2Q13268 280 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 MED30Q96HR3 178 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 NARFLQ9H6Q4 476 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 RAB18Q9NP72 206 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 DMKNQ6E0U4 476 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 BTLAQ7Z6A9 289 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 UBE2L5PA0A1B0GUS4 154 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 SPNP16150 400 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 OR8B12Q8NGG6 310 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 UQCC1Q9NVA1 299 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 ICAM5Q9UMF0 924 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 HRKO00198 91 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 TGOLN2O43493 480 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 HNF1AP20823 631 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 MPPED2Q15777 294 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 PTPMT1Q8WUK0 201 aaPredicted RBP13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 SCN3AQ9NY46 2000 aa13.09□□□□□ -0.31
KCNMA1-202ENST00000286628 FFAR1O14842 300 aa13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 MESTQ5EB52 335 aa13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 ZNF574Q6ZN55 896 aaPredicted RBP13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 RAB40CQ96S21 281 aa13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 CXXC4Q9H2H0 198 aa13.08□□□□□ -0.31
KCNMA1-202ENST00000286628 PATE3B3GLJ2 98 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 SFT2D2O95562 160 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 LPAR6P43657 344 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 NCR3LG1Q68D85 454 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 SLC16A12Q6ZSM3 486 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 OR4D11Q8NGI4 311 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 MEX3AA1L020 520 aaKnown RBP13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 ISXQ2M1V0 245 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
KCNMA1-202ENST00000286628 CNN1P51911 297 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-202ENST00000286628 Q3ZCU0 254 aa13.07□□□□□ -0.32
KCNMA1-202ENST00000286628 ZNF705AQ6ZN79 300 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-202ENST00000286628 ZAR1Q86SH2 424 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms