RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SERPINE3A8MV23 424 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 SEC14L6B5MCN3 397 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 TRAF3IP2O43734 574 aaPredicted RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 NME2P1O60361 137 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 RAD51DO75771 328 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 ONECUT2O95948 504 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 IFNA10P01566 189 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 SFTPBP07988 381 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 RPS10P46783 165 aaKnown RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 TMEM33P57088 247 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 ZNF616Q08AN1 781 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 FOXL2NBQ6ZUU3 175 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 TMEM104Q8NE00 496 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 OR2AJ1Q8NGZ0 328 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 RNASE11Q8TAA1 199 aaKnown RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 MAFIPQ8WZ33 124 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 ZNF501Q96CX3 271 aaPredicted RBP9.11□□□□□ -0.95
SKA1-201ENST00000285116 ARV1Q9H2C2 271 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 BCO1Q9HAY6 547 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 TUBD1Q9UJT1 453 aa9.11□□□□□ -0.95
SKA1-201ENST00000285116 BCAT2O15382 392 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 SLC31A2O15432 143 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 SOCS1O15524 211 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 CYC1P08574 325 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 CD63P08962 238 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 PI3P19957 117 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 BCKDHBP21953 392 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 NDUFA6P56556 154 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 TAS2R60P59551 318 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 SQSTM1Q13501 440 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 WDR74Q6RFH5 385 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 ZNF574Q6ZN55 896 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 FAM219AQ8IW50 185 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 FOXRED2Q8IWF2 684 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 UEVLDQ8IX04 471 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 ZNF101Q8IZC7 436 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 OR14K1Q8NGZ2 314 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 DNAJA3Q96EY1 480 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 MARS2Q96GW9 593 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 OR10A2Q9H208 303 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 DOK5Q9P104 306 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 TMED3Q9Y3Q3 217 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 ARID1BQ8NFD5 2236 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 DSPP15924 2871 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 A0A0U1RQV5 110 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 TOX3O15405 576 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 DUX1O43812 170 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 EFNA2O43921 213 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 DEDDO75618 318 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 NR2C1P13056 603 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 BTF3P20290 206 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 CHATP28329 748 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 CAMLGP49069 296 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 ARL4DP49703 201 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 SUCLG1P53597 346 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 ZNF121P58317 390 aaPredicted RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 NXPH1P58417 271 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 LSM6P62312 80 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 GABREP78334 506 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 CFHR1Q03591 330 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 CLINT1Q14677 625 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 ANKRD37Q7Z713 158 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 POC1BQ8TC44 478 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 S100PBPQ96BU1 408 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 RHOVQ96L33 236 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 C5orf34Q96MH7 638 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 GNRHR2Q96P88 292 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 PRRX2Q99811 253 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 IER2Q9BTL4 223 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
SKA1-201ENST00000285116 V9GYS6 101 aa9.1□□□□□ -0.95
SKA1-201ENST00000285116 FOLR1P15328 257 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 PTGDSP41222 190 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 OR3A4PP47883 348 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 FBXW4P57775 412 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 CLRN1P58418 232 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 MYBPHQ13203 477 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
SKA1-201ENST00000285116 RHBDD2Q6NTF9 364 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 CDPF1Q6NVV7 123 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 RPUSD3Q6P087 351 aaKnown RBP9.09□□□□□ -0.95
SKA1-201ENST00000285116 LANCL3Q6ZV70 420 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 RABEPKQ7Z6M1 372 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 SLC25A43Q8WUT9 341 aaPredicted RBP9.09□□□□□ -0.95
SKA1-201ENST00000285116 MR1Q95460 341 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 OXGR1Q96P68 337 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 PHF7Q9BWX1 381 aaPredicted RBP9.09□□□□□ -0.95
SKA1-201ENST00000285116 SMDT1Q9H4I9 107 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 PLEKHA2Q9HB19 425 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 GPR84Q9NQS5 396 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 C19orf12Q9NSK7 152 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 C1orf123Q9NWV4 160 aa9.09□□□□□ -0.95
SKA1-201ENST00000285116 STRAPQ9Y3F4 350 aaKnown RBP9.09□□□□□ -0.95
SKA1-201ENST00000285116 NCOR2Q9Y618 2525 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms