RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 OR56B1Q8NGI3 324 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 EGLN1Q9GZT9 426 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 SOCS1O15524 211 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 FBXO24O75426 580 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 EIF3GO75821 320 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 CELA3AP09093 270 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 CLDN15P56746 228 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 BTNL8Q6UX41 500 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 ZFP82Q8N141 532 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 ZIC4Q8N9L1 334 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 OR51F2Q8NH61 342 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM59Q9BXS4 323 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 FAM86C1Q9NVL1 165 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 LHX6Q9UPM6 363 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 ZFHX2Q9C0A1 2572 aaPredicted RBP15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 FIGNL2A6NMB9 653 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 STMND1H3BQB6 276 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 FAM76BQ5HYJ3 339 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 SOX7Q9BT81 388 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 OSGIN2Q9Y236 505 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 KIAA1549Q9HCM3 1950 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 LOC102725191A0A1B0GVB3 256 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 CXCL13O43927 109 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 AMY2BP19961 511 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 PTGFRP43088 359 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 F2RL1P55085 397 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM50BP56557 158 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 HABP2Q14520 560 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 ABHD17BQ5VST6 288 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 RPL7L1Q6DKI1 246 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 OR5AS1Q8N127 324 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 OR13G1Q8NGZ3 307 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 OR51E1Q8TCB6 317 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF292O60281 2723 aa15.98■□□□□ 0.15
PDLIM3-201ENST00000284767 EIF1BO60739 113 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 CST4P01036 141 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 SMIM6P0DI80 62 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 PTAFRP25105 342 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 CSNK1A1P48729 337 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 DVL1P1P54792 670 aaPredicted RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 TAS2R46P59540 309 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 CSNK2A1P68400 391 aaPredicted RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 ECH1Q13011 328 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 HMGN3Q15651 99 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 AADACL3Q5VUY0 350 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 PIP4P1Q86T03 277 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 LRRC18Q8N456 261 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 SULT4A1Q9BR01 284 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 URM1Q9BTM9 101 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 PRR13Q9NZ81 148 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 SPENQ96T58 3664 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF407Q9C0G0 2248 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 FAM157AC9JC47 383 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 RAD51DO75771 328 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 S100A8P05109 93 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 HKR1P10072 659 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 RPS2P15880 293 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 PI3P19957 117 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 SRSF6Q13247 344 aaKnown RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 SURF2Q15527 256 aaPredicted RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 OR2AJ1Q8NGZ0 328 aa15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF845Q96IR2 970 aaPredicted RBP15.97■□□□□ 0.15
PDLIM3-201ENST00000284767 ACAA1P09110 424 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 NME2P22392 152 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 OR3A4PP47883 348 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 OR3A2P47893 321 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 S100A10P60903 97 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 GABREP78334 506 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM268Q5VZI3 342 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM123Q8N131 208 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 EMG1Q92979 244 aaKnown RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 ARHGAP5-AS1Q96IT6 56 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 SPACA5Q96QH8 159 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 RBM24Q9BX46 236 aaKnown RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF319Q9P2F9 582 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 KPTNQ9Y664 436 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 C1orf196B1AJZ1 125 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF878C9JN71 531 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 GAPDHP04406 335 aaKnown RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 SERPINA5P05154 406 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 CD80P33681 288 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 CARD18P57730 90 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 ARFRP1Q13795 201 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 RSPO4Q2I0M5 234 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 RNF212Q495C1 297 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 RNF144BQ7Z419 303 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 OR10D3Q8NH80 312 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 KIRREL1Q96J84 757 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 NAA11Q9BSU3 229 aaPredicted RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 BANF2Q9H503 90 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 PNRC2Q9NPJ4 139 aaKnown RBP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 TIMM10BQ9Y5J6 103 aa15.96■□□□□ 0.15
PDLIM3-201ENST00000284767 C5orf63A6NC05 138 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 FAM166BA8MTA8 275 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 FTH1P19P0C7X4 201 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 OR1C1Q15619 314 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 DHRS11Q6UWP2 260 aa15.95■□□□□ 0.14
PDLIM3-201ENST00000284767 GSKIPQ9P0R6 139 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms