RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 OR5M11Q96RB7 305 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 TMEM167BQ9NRX6 74 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF230Q9UIE0 474 aaPredicted RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PITPNC1Q9UKF7 332 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 A4GNTQ9UNA3 340 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PSG11Q9UQ72 335 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 PCDHGA9Q9Y5G4 932 aaKnown RBP3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MTCH2Q9Y6C9 303 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 MAST2Q6P0Q8 1798 aa3.64□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF207O43670 478 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 HAND1O96004 215 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 CST4P01036 141 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 C1QBP02746 253 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 MYOGP15173 224 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 COX7A1P24310 79 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZBTB37Q5TC79 503 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 DHRS11Q6UWP2 260 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NFAM1Q8NET5 270 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 OR10D3Q8NH80 312 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 WFDC5Q8TCV5 224 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NAV2Q8IVL1 2488 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 PHOX2AO14813 284 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 KLK8O60259 260 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SLC25A5P05141 298 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ACAA1P09110 424 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 M6PRP20645 277 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 GALNSP34059 522 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 C21orf58P58505 322 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 MRPS11P82912 194 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 PDZK1IP1Q13113 114 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 MRPL58Q14197 206 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 BAK1Q16611 211 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 Q6ZPB1 254 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RTN4RL1Q86UN2 441 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 OR5AP2Q8NGF4 316 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 OR5M1Q8NGP8 315 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF596Q8TC21 504 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 VSIG4Q9Y279 399 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 LSM2Q9Y333 95 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 TIAM2Q8IVF5 1701 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 LRRK2Q5S007 2527 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 FAM87AP0C7U9 286 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ACP1P24666 158 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 CD80P33681 288 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 TMPRSS3P57727 454 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF117Q03924 483 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RRN3P1Q2M238 152 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 WIPI1Q5MNZ9 446 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SPNS3Q6ZMD2 512 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SLC16A12Q6ZSM3 486 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZFP62Q8NB50 900 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 OR5M9Q8NGP3 310 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 OR52I2Q8NH67 350 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SMIM14Q96QK8 99 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 AUNIPQ9H7T9 357 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 FBXO8Q9NRD0 319 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RNF7Q9UBF6 113 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NAT8BQ9UHF3 227 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 FOXD3Q9UJU5 478 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 UFC1Q9Y3C8 167 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NPTNQ9Y639 398 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 A0A0A6YYD5 115 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NME2P1O60361 137 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SLC6A1P30531 599 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZNF154Q13106 437 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 HLXQ14774 488 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RPEL1Q2QD12 228 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 DCAF10Q5QP82 559 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 DHRS7BQ6IAN0 325 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 Q7L0L9 218 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 TRILQ7L0X0 811 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RBM45Q8IUH3 476 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NKAIN4Q8IVV8 208 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 FAM219AQ8IW50 185 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZDHHC22Q8N966 263 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZBTB34Q8NCN2 500 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 GATA6Q92908 595 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 DERL3Q96Q80 235 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 CHRNA10Q9GZZ6 450 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 CRISPLD2Q9H0B8 497 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NARFLQ9H6Q4 476 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 MANBALQ9NQG1 85 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SF3B6Q9Y3B4 125 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 NAV3Q8IVL0 2385 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 XIRP1Q702N8 1843 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ATG2BQ96BY7 2078 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 DUXBA0A1W2PPF3 345 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZAR1LA6NP61 321 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 RAB27BO00194 218 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 SDCBPO00560 298 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 TAPBPO15533 448 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 HLA-GP17693 338 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 USF1P22415 310 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 PCSK6P29122 969 aa3.63□□□□□ -1.83
SCN3A-201ENST00000283254 GPR6P46095 362 aaPredicted RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 ZFP36L2P47974 494 aaKnown RBP3.63□□□□□ -1.83
SCN3A-201ENST00000283254 COMPP49747 757 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms