RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 KTI12Q96EK9 354 aaPredicted RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 RSG1Q9BU20 258 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SLC46A2Q9BY10 475 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 DUSP21Q9H596 190 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SLC25A22Q9H936 323 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 IGHV3-64DA0A0J9YX35 117 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 B4DEV8 164 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 TARM1B6A8C7 271 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 H3BP45 60 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 KCNAB1Q14722 419 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 RNPS1Q15287 305 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 CST9Q5W186 159 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 VN1R2Q8NFZ6 395 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 PRRX2Q99811 253 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 POMT2Q9UKY4 750 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 CSN3P07498 182 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 FAHP16930 419 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 RPS4Y1P22090 263 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 OR2Z1Q8NG97 314 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 DEFB127Q9H1M4 99 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 HINT3Q9NQE9 182 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 C11orf94C9JXX5 98 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SPINK4O60575 86 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 CEACAM6P40199 344 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 YBX1P67809 324 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 OR2G2Q8NGZ5 317 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SNRNP40Q96DI7 357 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SCMH1Q96GD3 660 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 AUNIPQ9H7T9 357 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 ACER3Q9NUN7 267 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 ZC3H12DA2A288 527 aaKnown RBP7.85□□□□□ -1.15
NIPBL-201ENST00000282516 CDRT15L2A8MXV6 281 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 H0YIG0 161 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 MASP2O00187 686 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 AP4M1O00189 453 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SYNGR2O43760 224 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 EPXP11678 715 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 ATF1P18846 271 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 PKIAP61925 76 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 FAM74A3Q4VXF1 159 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 VSTM2AQ8TAG5 236 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 SLC25A33Q9BSK2 321 aa7.85□□□□□ -1.15
NIPBL-201ENST00000282516 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 NUDT3O95989 172 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 CLDN18P56856 261 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TAS1R1Q7RTX1 841 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TGIF2LYQ8IUE0 185 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SSC5DA1L4H1 1573 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 F2RL2O00254 374 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 GP1BAP07359 652 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 NUFIP2Q7Z417 695 aaKnown RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PELI3Q8N2H9 469 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 MTURNQ8N3F0 131 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 DYNLRB2Q8TF09 96 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 STARD4Q96DR4 205 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 ADTRPQ96IZ2 230 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 FRG2CA6NGY1 282 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PCBP3P57721 371 aaKnown RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 CGB2Q6NT52 195 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SPSB1Q96BD6 273 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 CHRNA10Q9GZZ6 450 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PLPP1O14494 284 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF865P0CJ78 1059 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SPICQ8N5J4 248 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SARGQ9BW04 601 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PLSCR3Q9NRY6 295 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 CACNG5Q9UF02 275 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PITPNC1Q9UKF7 332 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TRGV8A0A0C4DH27 118 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PPIHO43447 177 aaKnown RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 ASCL1P50553 236 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF273Q14593 569 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 BCL7CQ8WUZ0 217 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 RASL12Q9NYN1 266 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 LPAR3Q9UBY5 353 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 COL6A6A6NMZ7 2263 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 APCSP02743 223 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SNRPEP62304 92 aaKnown RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TCTN1Q2MV58 587 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 SPATA46Q5T0L3 261 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 RNF165Q6ZSG1 346 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 OR10V1Q8NGI7 309 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PDE6DO43924 150 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 GPX5O75715 221 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TSPAN12O95859 305 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 MGPP08493 103 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 HLA-DRB5Q30154 266 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PTCRAQ6ISU1 281 aaPredicted RBP7.84□□□□□ -1.15
NIPBL-201ENST00000282516 OR2A5Q96R48 311 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 DOK5Q9P104 306 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 TOPAZ1Q8N9V7 1692 aa7.84□□□□□ -1.15
NIPBL-201ENST00000282516 PPICP45877 212 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 COL9A3Q14050 684 aaPredicted RBP7.84□□□□□ -1.16
NIPBL-201ENST00000282516 OR4A47Q6IF82 309 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 GFRALQ6UXV0 394 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 NUP37Q8NFH4 326 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 OR1L6Q8NGR2 347 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 DOK1Q99704 481 aa7.84□□□□□ -1.16
NIPBL-201ENST00000282516 ZAR1LA6NP61 321 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms