RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 POM121L2Q96KW2 1035 aa15.48■□□□□ 0.07
CAPN1-201ENST00000279247 SULT4A1Q9BR01 284 aa15.48■□□□□ 0.07
CAPN1-201ENST00000279247 C13orf42A0A1B0GVH6 325 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 DHRS7CA6NNS2 312 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 EEF1E1-BLOC1S5C9J1V9 151 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 PROB1E7EW31 1015 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 L7N2F9 121 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 CXCL2P19875 107 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ARPC4P59998 168 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 VWA1Q6PCB0 445 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 TERB2Q8NHR7 220 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 APOBEC3DQ96AK3 386 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-201ENST00000279247 HS3ST6Q96QI5 342 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 CMSS1Q9BQ75 279 aaKnown RBP15.47■□□□□ 0.07
CAPN1-201ENST00000279247 RNF122Q9H9V4 155 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 IL36RNQ9UBH0 155 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 AK3Q9UIJ7 227 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ROS1P08922 2347 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 F8VVB4 439 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 F8VWA3 439 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ARR3P36575 388 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 WNT5AP41221 380 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ALDH3B1P43353 468 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 STK11Q15831 433 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 FAM189A2Q15884 450 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 OSR2Q8N2R0 312 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ZNF488Q96MN9 340 aa15.47■□□□□ 0.07
CAPN1-201ENST00000279247 ZNF732B4DXR9 585 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 MPC2O95563 127 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 ERVS71-1P61550 626 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 PNLIPRP3Q17RR3 467 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 Q6ZSR3 168 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 C5orf24Q7Z6I8 188 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 SLC30A7Q8NEW0 376 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 OR10AD1Q8NGE0 317 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 TAAR6Q96RI8 345 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 REPIN1Q9BWE0 567 aaKnown RBP15.46■□□□□ 0.07
CAPN1-201ENST00000279247 PPA2Q9H2U2 334 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 AGFG2O95081 481 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 CFDP00746 253 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-201ENST00000279247 PGAM2P15259 253 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 GLRA1P23415 457 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 PER3P56645 1201 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 TMEM42Q69YG0 159 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 OR13G1Q8NGZ3 307 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 CLEC4MQ9H2X3 399 aaPredicted RBP15.46■□□□□ 0.07
CAPN1-201ENST00000279247 ZNF442Q9H7R0 627 aa15.46■□□□□ 0.07
CAPN1-201ENST00000279247 ZGRF1Q86YA3 2104 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 RGS11O94810 467 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 OR2A4O95047 310 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 ALX3O95076 343 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 UBE2NP61088 152 aaKnown RBP15.46■□□□□ 0.06
CAPN1-201ENST00000279247 FOXF2Q12947 444 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 NDUFA5Q16718 116 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 NRN1LQ496H8 165 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 COLCA1Q6ZS62 124 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 EMG1Q92979 244 aaKnown RBP15.46■□□□□ 0.06
CAPN1-201ENST00000279247 GPR137Q96N19 417 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 OR2A7Q96R45 310 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 OCSTAMPQ9BR26 566 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 TM2D1Q9BX74 207 aa15.46■□□□□ 0.06
CAPN1-201ENST00000279247 FGF23Q9GZV9 251 aaPredicted RBP15.46■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF107Q9UII5 783 aaPredicted RBP15.46■□□□□ 0.06
CAPN1-201ENST00000279247 NBASA2RRP1 2371 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 C9orf170A2RU37 121 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 FIGNL2A6NMB9 653 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF891A8MT65 544 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 K7EM74 188 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 M0R233 179 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 GLI4P10075 376 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 BCL3P20749 454 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 NFYAP23511 347 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 BEX5Q5H9J7 111 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 KIAA2026Q5HYC2 2103 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 LY6G6FQ5SQ64 297 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 RPUSD3Q6P087 351 aaKnown RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 LYG2Q86SG7 212 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 SLC25A42Q86VD7 318 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 C9orf106Q8NAJ2 232 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 CCDC54Q8NEL0 328 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 HPSE2Q8WWQ2 592 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 CD300LBA8K4G0 201 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 SERPINE3A8MV23 424 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 H3BUI4 141 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 KCNAB3O43448 404 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 IGHV1-2P23083 117 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 CA6P23280 308 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 HAGHLQ6PII5 290 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 HOGA1Q86XE5 327 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF680Q8NEM1 530 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 BCL2L2Q92843 193 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 TOMM40LQ969M1 308 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 CPNE2Q96FN4 548 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 NUDT16L1Q9BRJ7 211 aaKnown RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 SLC2A8Q9NY64 477 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 ZNF391Q9UJN7 358 aa15.45■□□□□ 0.06
CAPN1-201ENST00000279247 TPRP12270 2363 aaKnown RBP15.45■□□□□ 0.06
CAPN1-201ENST00000279247 SMG1Q96Q15 3661 aaKnown RBP15.44■□□□□ 0.06
CAPN1-201ENST00000279247 C5orf51A6NDU8 294 aa15.44■□□□□ 0.06
CAPN1-201ENST00000279247 FOXI3A8MTJ6 420 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms