RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OMGP23515 440 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 RELBQ01201 579 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 IL24Q13007 206 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 METAP1DQ6UB28 335 aaPredicted RBP11.83□□□□□ -0.52
HMGN3-201ENST00000275036 KCTD20Q7Z5Y7 419 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 LHFPL3Q86UP9 236 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 CCDC54Q8NEL0 328 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 OR51A4Q8NGJ6 313 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 C4orf36Q96KX1 117 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 CHIAQ9BZP6 476 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 PKIBQ9C010 78 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 ISG20L2Q9H9L3 353 aaKnown RBP11.83□□□□□ -0.52
HMGN3-201ENST00000275036 UNKLQ9H9P5 680 aaKnown RBP11.83□□□□□ -0.52
HMGN3-201ENST00000275036 NOX4Q9NPH5 578 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 C19orf12Q9NSK7 152 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 MTCH1Q9NZJ7 389 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 SLC7A11Q9UPY5 501 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 POLDIP2Q9Y2S7 368 aa11.83□□□□□ -0.52
HMGN3-201ENST00000275036 A0A1W2PQ09 198 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 OR4C45A6NMZ5 311 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 IGHA1P01876 353 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 ISG15P05161 165 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 HTR1AP08908 422 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 PRDX2P32119 198 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 GALEQ14376 348 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 CMTM4Q8IZR5 234 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 PNKDQ8N490 385 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 ALG8Q9BVK2 526 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 OR14J1Q9UGF5 321 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 MEGF8Q7Z7M0 2845 aa11.82□□□□□ -0.52
HMGN3-201ENST00000275036 A0A1W2PRD5 423 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 A0A1W2PRF3 423 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 A0A1W2PRM7 423 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 SNTNA6NMZ2 147 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 M0R1W7 72 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 MPZL2O60487 215 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 WBP4O75554 376 aaKnown RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 GATBO75879 557 aaKnown RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 INMTO95050 263 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 CCR9P51686 369 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 FUT6P51993 359 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 CAPZA1P52907 286 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 ACTA2P62736 377 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 ACTG2P63267 376 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 SMN1Q16637 294 aaKnown RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 ZSCAN26Q16670 478 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 HCP5Q6MZN7 132 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 FIP1L1Q6UN15 594 aaKnown RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 RNF144BQ7Z419 303 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 FAM185AQ8N0U4 392 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 PP6455Q8WZ26 134 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 SLAMF9Q96A28 289 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 FGGYQ96C11 551 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 C10orf35Q96D05 121 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 MRPS18AQ9NVS2 196 aaKnown RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
HMGN3-201ENST00000275036 SMPD3Q9NY59 655 aaPredicted RBP11.81□□□□□ -0.52
HMGN3-201ENST00000275036 TRBV23-1A0A0A0MS06 115 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 E9PI62 339 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SLC1A7O00341 560 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SPRY1O43609 319 aaPredicted RBP11.8□□□□□ -0.52
HMGN3-201ENST00000275036 CLIC3O95833 236 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 KNG1P01042 644 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 RAB40BQ12829 278 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 ALKBH1Q13686 389 aaKnown RBP11.8□□□□□ -0.52
HMGN3-201ENST00000275036 LPCAT4Q643R3 524 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 CRIP3Q6Q6R5 217 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SHISA2Q6UWI4 295 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 C1orf122Q6ZSJ8 110 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SLC25A26Q70HW3 274 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 UTS2BQ765I0 119 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SYS1Q8N2H4 156 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 SGMS2Q8NHU3 365 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 STMN2Q93045 179 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 BORCS8Q96FH0 119 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 CEP19Q96LK0 163 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 Q96MT0 163 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 METTL8Q9H825 291 aaKnown RBP11.8□□□□□ -0.52
HMGN3-201ENST00000275036 C1RLQ9NZP8 487 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 IL36RNQ9UBH0 155 aa11.8□□□□□ -0.52
HMGN3-201ENST00000275036 NPFFO15130 113 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 FADS2O95864 444 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 SERPINA3P01011 423 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 TK1P04183 234 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 ATF1P18846 271 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 AZGP1P25311 298 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 IER3P46695 156 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 NPBWR2P48146 333 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 RPL31P62899 125 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 COL10A1Q03692 680 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms