RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RAB5CP51148 216 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 MYBPHQ13203 477 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
COL8A1-202ENST00000273342 TAAR9Q96RI9 348 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 KLRF1Q9NZS2 232 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 KLHL13Q9P2N7 655 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 CEACAM18A8MTB9 384 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 YKT6O15498 198 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 IGHMP01871 453 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 QDPRP09417 244 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 APOBEC1P41238 236 aaKnown RBP11.31□□□□□ -0.6
COL8A1-202ENST00000273342 HMGN3Q15651 99 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 TMEM234Q8WY98 164 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 ZDHHC8Q9ULC8 765 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
COL8A1-202ENST00000273342 FAM230AA0A1W2PPH8 454 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 RHPN2P1A8MT19 583 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 WRBO00258 174 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 CHATP28329 748 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 TLE1Q04724 770 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 UEVLDQ8IX04 471 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 B3GAT1Q9P2W7 334 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 THADAQ6YHU6 1953 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 H3BQ15 152 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 CYB5BO43169 146 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 GAPDHP04406 335 aaKnown RBP11.3□□□□□ -0.6
COL8A1-202ENST00000273342 UBE2KP61086 200 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 Q8WTZ3 238 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 KLHDC7BQ96G42 594 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 GPR173Q9NS66 373 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 GAR1Q9NY12 217 aaKnown RBP11.3□□□□□ -0.6
COL8A1-202ENST00000273342 PIGLQ9Y2B2 252 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 HDGFL3Q9Y3E1 203 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 POMT1Q9Y6A1 747 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 RALGAPA1Q6GYQ0 2036 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 E5RGE8 158 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 CST7O76096 145 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 TRGC2P03986 189 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 PAX6P26367 422 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 RUNX1Q01196 453 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 FAM69BQ5VUD6 431 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 OR14K1Q8NGZ2 314 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 OR2G3Q8NGZ4 309 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 LYZL4Q96KX0 146 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-202ENST00000273342 MSTNO14793 375 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-202ENST00000273342 PNLIPP16233 465 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 FBLP22087 321 aaKnown RBP11.29□□□□□ -0.6
COL8A1-202ENST00000273342 STARD6P59095 220 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 HYAL1Q12794 435 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
COL8A1-202ENST00000273342 CCDC54Q8NEL0 328 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 OR1L3Q8NH93 324 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 LYPD6BQ8NI32 183 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 CD207Q9UJ71 328 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 IGKV3D-11A0A0A0MRZ8 115 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 IGHV3-15A0A0B4J1V0 119 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 A0A1W2PQD3 144 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 BLACEA4D250 179 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 CRYM-AS1A6NIL9 109 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 LIPT2A6NK58 231 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 SLC34A2O95436 690 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 HEXBP07686 556 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 FABP4P15090 132 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
COL8A1-202ENST00000273342 DDIT4LQ96D03 193 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 HS3ST3B1Q9Y662 390 aa11.29□□□□□ -0.6
COL8A1-202ENST00000273342 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 FOLR1P15328 257 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 HOXA5P20719 270 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 P2RY1P47900 373 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 OR1D5P58170 312 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 RNF4P78317 190 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 GAMTQ14353 236 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 RHEBQ15382 184 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 ZNF574Q6ZN55 896 aaPredicted RBP11.28□□□□□ -0.6
COL8A1-202ENST00000273342 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 ANXA10Q9UJ72 324 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 ANAPC10Q9UM13 185 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 SLC7A11Q9UPY5 501 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 CCDC187A0A096LP49 1063 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
COL8A1-202ENST00000273342 IGHG1P01857 330 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms