RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SPATA46Q5T0L3 261 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 VWA1Q6PCB0 445 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 ZNF611Q8N823 705 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 OR10AD1Q8NGE0 317 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 OR51F2Q8NH61 342 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 GMPPAQ96IJ6 420 aaPredicted RBP19.91■□□□□ 0.78
RAB40B-201ENST00000269347 LIME1Q9H400 295 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 C5orf66Q9H5L9 145 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 TRAV17A0A0B4J275 112 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 CFDP00746 253 aaPredicted RBP19.91■□□□□ 0.78
RAB40B-201ENST00000269347 CSTBP04080 98 aaKnown RBP19.91■□□□□ 0.78
RAB40B-201ENST00000269347 AMY2BP19961 511 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 ARR3P36575 388 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 SLC25A26Q70HW3 274 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 P4HA3Q7Z4N8 544 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 APOBEC3DQ96AK3 386 aaPredicted RBP19.91■□□□□ 0.78
RAB40B-201ENST00000269347 ZNF701Q9NV72 531 aaPredicted RBP19.91■□□□□ 0.78
RAB40B-201ENST00000269347 SHANK1Q9Y566 2161 aa19.91■□□□□ 0.78
RAB40B-201ENST00000269347 SERPINA5P05154 406 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 AKR1C4P17516 323 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 CHATP28329 748 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 DHODHQ02127 395 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 EXOSC2Q13868 293 aaKnown RBP19.9■□□□□ 0.78
RAB40B-201ENST00000269347 GRK1Q15835 563 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 C5orf24Q7Z6I8 188 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 CSNK2A3Q8NEV1 391 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 APC2O95996 2303 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 PQLC2LA1A4F0 135 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 C9orf170A2RU37 121 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 M0R233 179 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 IL2RAP01589 272 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 IFNA6P05013 189 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 GPM6AP51674 278 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 ATP1B3P54709 279 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 LHFPL1Q86WI0 220 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 ZDHHC22Q8N966 263 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 TERB2Q8NHR7 220 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 CCDC107Q8WV48 283 aa19.9■□□□□ 0.78
RAB40B-201ENST00000269347 TRAV14DV4A0A0A6YYC5 116 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 OR5H14A6NHG9 310 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 ZNF891A8MT65 544 aaPredicted RBP19.89■□□□□ 0.77
RAB40B-201ENST00000269347 SERPINE3A8MV23 424 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 F5H5P2 479 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 TBPP20226 339 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 C4BPBP20851 252 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 OPRM1P35372 400 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 KIR2DL2P43627 348 aaPredicted RBP19.89■□□□□ 0.77
RAB40B-201ENST00000269347 MRPL21Q7Z2W9 205 aaKnown RBP19.89■□□□□ 0.77
RAB40B-201ENST00000269347 GP6Q9HCN6 339 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 UBQLN2Q9UHD9 624 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 GPR132Q9UNW8 380 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 SLC7A11Q9UPY5 501 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 OSGIN2Q9Y236 505 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 ST3GAL6Q9Y274 331 aa19.89■□□□□ 0.77
RAB40B-201ENST00000269347 LEUTXA8MZ59 168 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 ERVS71-1P61550 626 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 LYG2Q86SG7 212 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 ZSCAN4Q8NAM6 433 aaPredicted RBP19.88■□□□□ 0.77
RAB40B-201ENST00000269347 OR5H2Q8NGV7 314 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 ELMOD3Q96FG2 381 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 MARS2Q96GW9 593 aaKnown RBP19.88■□□□□ 0.77
RAB40B-201ENST00000269347 RTBDNQ9BSG5 229 aaPredicted RBP19.88■□□□□ 0.77
RAB40B-201ENST00000269347 LINC00862A6NCI5 91 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 BCL3P20749 454 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 OVCH2Q7RTZ1 564 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 OSR2Q8N2R0 312 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 PXT1Q8NFP0 134 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 CASTOR1Q8WTX7 329 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 PCNPQ8WW12 178 aaKnown RBP19.88■□□□□ 0.77
RAB40B-201ENST00000269347 SLAMF9Q96A28 289 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 TMPRSS13Q9BYE2 586 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 PLSCR2Q9NRY7 297 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 LUZP4Q9P127 313 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 DKK4Q9UBT3 224 aa19.88■□□□□ 0.77
RAB40B-201ENST00000269347 L7N2F9 121 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 AQP7O14520 342 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 ZNF14P17017 642 aaPredicted RBP19.87■□□□□ 0.77
RAB40B-201ENST00000269347 IKZF1Q13422 519 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 OPCMLQ14982 345 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 ESCO2Q56NI9 601 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 SLC30A7Q8NEW0 376 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 CCDC120Q96HB5 630 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 EHFQ9NZC4 300 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 NOP16Q9Y3C1 178 aaKnown RBP19.87■□□□□ 0.77
RAB40B-201ENST00000269347 CD300LBA8K4G0 201 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 NFYAP23511 347 aaPredicted RBP19.87■□□□□ 0.77
RAB40B-201ENST00000269347 CD34P28906 385 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 HAAOP46952 286 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 SORDQ00796 357 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 ZMYND11Q15326 602 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 C11orf88Q6PI97 169 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 FAM214BQ7L5A3 538 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 CNEP1R1Q8N9A8 125 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 OR5AP2Q8NGF4 316 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 SEC22AQ96IW7 307 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 C1QTNF6Q9BXI9 259 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 COL25A1Q9BXS0 654 aaPredicted RBP19.87■□□□□ 0.77
RAB40B-201ENST00000269347 MTCH1Q9NZJ7 389 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 CEP295Q9C0D2 2601 aa19.87■□□□□ 0.77
RAB40B-201ENST00000269347 SMG1Q96Q15 3661 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms