RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 HLA-DRB3P79483 266 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 PAX5Q02548 391 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 ZP2Q05996 745 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 ABLIM2Q6H8Q1 611 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 DEGS2Q6QHC5 323 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 GALNTL5Q7Z4T8 443 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 OR4X1Q8NH49 305 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 BMFQ96LC9 184 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 FBLN5Q9UBX5 448 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 V9GYS6 101 aa11.54□□□□□ -0.56
NUP54-201ENST00000264883 A8MVM7 634 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 CLDN34H7C241 214 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 M0QZK8 103 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 GGCTO75223 188 aaKnown RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 SRSF10O75494 262 aaKnown RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 RND2P52198 227 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ICAM4Q14773 271 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 GPR157Q5UAW9 335 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 SLC22A24Q8N4F4 322 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 GATSQ8NAP1 163 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MRPL24Q96A35 216 aaKnown RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 DNAJA3Q96EY1 480 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MRGPRX1Q96LB2 322 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 SLC46A1Q96NT5 459 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ASCL3Q9NQ33 180 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 CLDN16Q9Y5I7 305 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 FRG2CA6NGY1 282 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 TNFP01375 233 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 CLPSP04118 112 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MMP7P09237 267 aaPredicted RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 HSD11B1P28845 292 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 GNALP38405 381 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 OR3A1P47881 315 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 PLAC9Q5JTB6 97 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 DMRTA1Q5VZB9 504 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 DNM1P34Q6PK57 102 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 CBLN3Q6UW01 205 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ZNF283Q8N7M2 679 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 OR8G5Q8NG78 346 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 FGGYQ96C11 551 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ABHD6Q9BV23 337 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ZNF700Q9H0M5 742 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.53□□□□□ -0.56
NUP54-201ENST00000264883 MRPL22Q9NWU5 206 aaKnown RBP11.53□□□□□ -0.56
NUP54-201ENST00000264883 EHFQ9NZC4 300 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 MPDZO75970 2070 aa11.53□□□□□ -0.56
NUP54-201ENST00000264883 ATXN7O15265 892 aaPredicted RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 SLC16A7O60669 478 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 HIST1H1DP16402 221 aaKnown RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 FZD2Q14332 565 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 FAM189A2Q15884 450 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ACKR1Q16570 336 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 IQCJQ1A5X6 159 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 ABHD14AQ9BUJ0 271 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 SRPK3Q9UPE1 567 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 CACNA1IQ9P0X4 2223 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 A0A1W2PQD3 144 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 TMEM14DPA8MWL7 114 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 P2RY10O00398 339 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 TP53I11O14683 189 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 SOCS1O15524 211 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 XRCC2O43543 280 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 RAD51DO75771 328 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 SRFP11831 508 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 FOLR1P15328 257 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 PGCP20142 388 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 DCAF7P61962 342 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ZNF774Q6NX45 483 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 SLC16A14Q7RTX9 510 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ZFP62Q8NB50 900 aaPredicted RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 OR2G3Q8NGZ4 309 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ZNF385AQ96PM9 386 aaKnown RBP11.52□□□□□ -0.57
NUP54-201ENST00000264883 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 MMP17Q9ULZ9 603 aa11.52□□□□□ -0.57
NUP54-201ENST00000264883 ARID1AO14497 2285 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 TMEM210A6NLX4 147 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 H0Y8X5 98 aa11.51□□□□□ -0.57
NUP54-201ENST00000264883 CSNK2A1P68400 391 aaPredicted RBP11.51□□□□□ -0.57
NUP54-201ENST00000264883 COL10A1Q03692 680 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms