RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CAV2P51636 162 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 KISS1Q15726 138 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 OR51M1Q9H341 326 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 PATZ1Q9HBE1 687 aaKnown RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 NPDC1Q9NQX5 325 aaPredicted RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 TERTO14746 1132 aaKnown RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 HPP00738 406 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 HIST1H1DP16402 221 aaKnown RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 CD96P40200 585 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 NPY4RP50391 375 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 DHRS2Q13268 280 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 DMRTC1Q5HYR2 192 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 ZNF385CQ66K41 422 aaPredicted RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 B3GNTL1Q67FW5 361 aaPredicted RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 GVQW1Q8N7I0 195 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 CT55Q8WUE5 264 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 IMMP1LQ96LU5 166 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 OR5B12Q96R08 314 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 FBXO4Q9UKT5 387 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 SPTBN5Q9NRC6 3674 aaKnown RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 A0A0J9YW62 118 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 LOC101059948A0A1B0GTJ6 334 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 KCNAB3O43448 404 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 DNPH1O43598 174 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 RAD51DO75771 328 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 MGMTP16455 207 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 MOGAT2Q3SYC2 334 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 DRAM2Q6UX65 266 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 MOB3CQ70IA8 216 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 HSD17B13Q7Z5P4 300 aaPredicted RBP14.34□□□□□ -0.11
CTCF-201ENST00000264010 PIGCQ92535 297 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 RHOFQ9HBH0 211 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 OPN4Q9UHM6 478 aa14.34□□□□□ -0.11
CTCF-201ENST00000264010 CYB5BO43169 146 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 CDC14BO60729 498 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 OMGP23515 440 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 RAB35Q15286 201 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ATPAF1Q5TC12 328 aaPredicted RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 CHST6Q9GZX3 395 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 PCDH15Q96QU1 1955 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 RAMP1O60894 148 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 CXCL2P19875 107 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ZNF133P52736 654 aaPredicted RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 SNU13P55769 128 aaKnown RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 GLYATL2Q8WU03 294 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 PPP1R1CQ8WVI7 109 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 HAS2Q92819 552 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 AHCTF1Q8WYP5 2266 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 TUBAL3A6NHL2 446 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 HMSDA8MTL9 139 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 GP1BAP07359 652 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 SFTA3P0C7M3 94 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 NPBWR1P48145 328 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ZP1P60852 638 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 HERV-K104P61576 105 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 PLCXD3Q63HM9 321 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 LINC00696Q6ZRV3 163 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 MARCH1Q8TCQ1 289 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ALKBH3Q96Q83 286 aaPredicted RBP14.33□□□□□ -0.12
CTCF-201ENST00000264010 CLCC1Q96S66 551 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ZNF442Q9H7R0 627 aa14.33□□□□□ -0.12
CTCF-201ENST00000264010 ARGFXA6NJG6 315 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 ONECUT2O95948 504 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 UMODP07911 640 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 B4GALT1P15291 398 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 CLDN15P56746 228 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 FAM185AQ8N0U4 392 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 ARRDC1Q8N5I2 433 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 OR1F12Q8NHA8 337 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 LIN37Q96GY3 246 aaPredicted RBP14.32□□□□□ -0.12
CTCF-201ENST00000264010 KLK13Q9UKR3 277 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 TCF21O43680 179 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 PTGDSP41222 190 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 CPNE4Q96A23 557 aaPredicted RBP14.32□□□□□ -0.12
CTCF-201ENST00000264010 SLC25A28Q96A46 364 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 REEP6Q96HR9 211 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 AP1S3Q96PC3 154 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 RFPL4AA6NLU0 287 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 RFPL4AL1F8VTS6 287 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 RAB27BO00194 218 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 CEACAM16Q2WEN9 425 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 SLC23A3Q6PIS1 610 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 SGPP2Q8IWX5 399 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 NECAP1Q8NC96 275 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 ARHGAP5-AS1Q96IT6 56 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 EDEM2Q9BV94 578 aa14.32□□□□□ -0.12
CTCF-201ENST00000264010 SDK2Q58EX2 2172 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 SVILO95425 2214 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 AP4M1O00189 453 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 Q6ZRG5 221 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 MRPL21Q7Z2W9 205 aaKnown RBP14.31□□□□□ -0.12
CTCF-201ENST00000264010 OR5M9Q8NGP3 310 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 OR5M8Q8NGP6 311 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 OR10D3Q8NH80 312 aa14.31□□□□□ -0.12
CTCF-201ENST00000264010 RNF166Q96A37 237 aaPredicted RBP14.31□□□□□ -0.12
CTCF-201ENST00000264010 FOXB1Q99853 325 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms