RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 SLC29A1Q99808 456 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 S100A14Q9HCY8 104 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 C1RLQ9NZP8 487 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 AASSQ9UDR5 926 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 EXOGQ9Y2C4 368 aaKnown RBP13.17□□□□□ -0.3
USE1-201ENST00000263897 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 IGKV1-27A0A075B6S5 117 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 LOC107986453A0A1B0GWG9 222 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
USE1-201ENST00000263897 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 FBP1P09467 338 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 UBCP0CG48 685 aaKnown RBP13.16□□□□□ -0.3
USE1-201ENST00000263897 GABRB1P18505 474 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 CEBPDP49716 269 aaPredicted RBP13.16□□□□□ -0.3
USE1-201ENST00000263897 OR12D2P58182 307 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 RPL15P61313 204 aaKnown RBP13.16□□□□□ -0.3
USE1-201ENST00000263897 KLRD1Q13241 179 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 TMEM244Q5VVB8 128 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 NCR3LG1Q68D85 454 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 FAM185AQ8N0U4 392 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 BATF2Q8N1L9 274 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 ACBD7Q8N6N7 88 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 CHST5Q9GZS9 411 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 SLITRK2Q9H156 845 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 DPAGT1Q9H3H5 408 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 C19orf12Q9NSK7 152 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 MTCH1Q9NZJ7 389 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 FRRS1LQ9P0K9 344 aa13.16□□□□□ -0.3
USE1-201ENST00000263897 A0A1W2PRD5 423 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 A0A1W2PRF3 423 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 A0A1W2PRM7 423 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 H0YAE9 185 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 SLC16A6O15403 523 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 NDUFA7O95182 113 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 ISG15P05161 165 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 NANOS3P60323 173 aaKnown RBP13.15□□□□□ -0.3
USE1-201ENST00000263897 RPL31P62899 125 aaKnown RBP13.15□□□□□ -0.3
USE1-201ENST00000263897 RELBQ01201 579 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 ACSM1Q08AH1 577 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 ZBTB49Q6ZSB9 765 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 PNKDQ8N490 385 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 RHOXF1Q8NHV9 184 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 PP6455Q8WZ26 134 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 LGALS12Q96DT0 336 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 BORCS8Q96FH0 119 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 BEX1Q9HBH7 125 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 OR14J1Q9UGF5 321 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
USE1-201ENST00000263897 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.3
USE1-201ENST00000263897 MEIOCA2RUB1 952 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 F8VVB4 439 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 F8VWA3 439 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 J3QLW9 94 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 SPRY1O43609 319 aaPredicted RBP13.14□□□□□ -0.31
USE1-201ENST00000263897 GPR137BO60478 399 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 MPZL2O60487 215 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 KNG1P01042 644 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 TK1P04183 234 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 HTR1AP08908 422 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 ZNF19P17023 458 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 SAA4P35542 130 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 CCR9P51686 369 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 RAG2P55895 527 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 HCP5Q6MZN7 132 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 EGFL6Q8IUX8 553 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 PQLC1Q8N2U9 271 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 C11orf42Q8N5U0 333 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 DNAAF1Q8NEP3 725 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 FGGYQ96C11 551 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 ADAT3Q96EY9 351 aaPredicted RBP13.14□□□□□ -0.31
USE1-201ENST00000263897 CEP19Q96LK0 163 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 Q96MT0 163 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 FAM234AQ9H0X4 552 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
USE1-201ENST00000263897 IGKV1-9A0A0C4DH69 117 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 K7N7A8 449 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 CHRM2P08172 466 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 RBP2P50120 134 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 ATP1B3P54709 279 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 GALEQ14376 348 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 CNN3Q15417 329 aaKnown RBP13.13□□□□□ -0.31
USE1-201ENST00000263897 TAF9Q16594 264 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 SLC25A26Q70HW3 274 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 LHFPL3Q86UP9 236 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 OR4M1Q8NGD0 313 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 HEXA-AS1Q9H8Q6 139 aa13.13□□□□□ -0.31
USE1-201ENST00000263897 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms