RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 A0A1W2PR64 198 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PRS3 328 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PRV1 198 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 AQP7P3A6NL99 342 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 KIR3DP1A8MWS1 328 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 TSPAN15O95858 294 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 MBPP02686 304 aaPredicted RBP7.96□□□□□ -1.14
MSH4-201ENST00000263187 DUSP1P28562 367 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 OR2B8PP59922 312 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 SHBQ15464 509 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 AVPI1Q5T686 147 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 RPUSD3Q6P087 351 aaKnown RBP7.96□□□□□ -1.14
MSH4-201ENST00000263187 FBXL14Q8N1E6 418 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 NANPQ8TBE9 248 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 SLC22A8Q8TCC7 542 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 EMG1Q92979 244 aaKnown RBP7.96□□□□□ -1.14
MSH4-201ENST00000263187 KIRREL1Q96J84 757 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 AQP10Q96PS8 301 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 PRRX2Q99811 253 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 WFDC1Q9HC57 220 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 C1orf123Q9NWV4 160 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 P4HTMQ9NXG6 502 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 DKKL1Q9UK85 242 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 CHCHD2Q9Y6H1 151 aaPredicted RBP7.96□□□□□ -1.14
MSH4-201ENST00000263187 DNAJC13O75165 2243 aa7.96□□□□□ -1.14
MSH4-201ENST00000263187 A6NLC8 198 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 TRAPPC6AO75865 159 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 ONECUT2O95948 504 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 IFNA21P01568 189 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 JMJD7P0C870 316 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 RD3LP0DJH9 198 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CCL4P13236 92 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 RPS18P62269 152 aaKnown RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 GRB2P62993 217 aaKnown RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 ESPL1Q14674 2120 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SLC23A3Q6PIS1 610 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 GLYATL2Q8WU03 294 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 RTN4IP1Q8WWV3 396 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 PIGCQ92535 297 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SCGB3A2Q96PL1 93 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 USB1Q9BQ65 265 aaKnown RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 SEC11CQ9BY50 192 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SRXN1Q9BYN0 137 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CHRNA10Q9GZZ6 450 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 UBE2ZQ9H832 354 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 MOB1AQ9H8S9 216 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SPACA1Q9HBV2 294 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 A0A0J9YW62 118 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PPE3 182 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 GPR37O15354 613 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 PHF1O43189 567 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 DHHO43323 396 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SUMO3P55854 103 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 SLC35A1P78382 337 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 IGFBP7Q16270 282 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 PNLIPRP3Q17RR3 467 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 ACTBL2Q562R1 376 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 DHRS7BQ6IAN0 325 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 WDR74Q6RFH5 385 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 FAM180AQ6UWF9 173 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 MYPOPQ86VE0 399 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 FGFBP3Q8TAT2 258 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 ABHD14AQ9BUJ0 271 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 NELFAQ9H3P2 528 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 ANXA10Q9UJ72 324 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 EDARQ9UNE0 448 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 MEMO1Q9Y316 297 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 A0A1W2PPH5 198 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 EIF3GO75821 320 aaKnown RBP eCLIP7.95□□□□□ -1.14
MSH4-201ENST00000263187 ZNF806P0C7X5 589 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 PET100P0DJ07 73 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 ZNF728P0DKX0 622 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CBX5P45973 191 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CAMLGP49069 296 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 GSK3AP49840 483 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 SPIN3Q5JUX0 258 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 TMEM182Q6ZP80 229 aaPredicted RBP7.95□□□□□ -1.14
MSH4-201ENST00000263187 RABEPKQ7Z6M1 372 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 OR9K2Q8NGE7 335 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 HAS2Q92819 552 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CHRDQ9H2X0 955 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 OR51B6Q9H340 312 aa7.95□□□□□ -1.14
MSH4-201ENST00000263187 CCDC187A0A096LP49 1063 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 IGHV3-64DA0A0J9YX35 117 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 OR7C1O76099 320 aaPredicted RBP7.94□□□□□ -1.14
MSH4-201ENST00000263187 CFIP05156 583 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 NAAAQ02083 359 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 HNF4GQ14541 408 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 IGSF11Q5DX21 431 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 ADAM5Q6NVV9 412 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 FAM89BQ8N5H3 189 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 TMEM217Q8N7C4 229 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 CADM4Q8NFZ8 388 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 TGIF2Q9GZN2 237 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 CHST5Q9GZS9 411 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 ZNF442Q9H7R0 627 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 CARHSP1Q9Y2V2 147 aaKnown RBP7.94□□□□□ -1.14
MSH4-201ENST00000263187 IGKV1-12A0A0C4DH73 117 aa7.94□□□□□ -1.14
MSH4-201ENST00000263187 CDRT15L2A8MXV6 281 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms