RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DHRS11Q6UWP2 260 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 IFI44Q8TCB0 444 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 PRRX2Q99811 253 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.29
DDX56-201ENST00000258772 CFAP54Q96N23 3096 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 FBXO24O75426 580 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 NTF4P34130 210 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 OPRM1P35372 400 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 TMEM33P57088 247 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 GPR137CQ8N3F9 429 aa13.26□□□□□ -0.29
DDX56-201ENST00000258772 CMSS1Q9BQ75 279 aaKnown RBP13.26□□□□□ -0.29
DDX56-201ENST00000258772 SF3B5Q9BWJ5 86 aaKnown RBP13.26□□□□□ -0.29
DDX56-201ENST00000258772 SAV1Q9H4B6 383 aaPredicted RBP13.26□□□□□ -0.29
DDX56-201ENST00000258772 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 RNASEK-C17orf49H0YIS7 233 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 JTBO76095 146 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 GAPDHP04406 335 aaKnown RBP13.25□□□□□ -0.29
DDX56-201ENST00000258772 DTYMKP23919 212 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 PRSS12P56730 875 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 PIGPP57054 158 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 RAC3P60763 192 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CNN3Q15417 329 aaKnown RBP13.25□□□□□ -0.29
DDX56-201ENST00000258772 OR1F12Q8NHA8 337 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CPNE2Q96FN4 548 aaPredicted RBP13.25□□□□□ -0.29
DDX56-201ENST00000258772 SULT4A1Q9BR01 284 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CRLF2Q9HC73 371 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 NECAP2Q9NVZ3 263 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 MLXQ9UH92 298 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 LSM5Q9Y4Y9 91 aaKnown RBP13.25□□□□□ -0.29
DDX56-201ENST00000258772 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 GJE1A6NN92 205 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 LCATP04180 440 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 FCGR3AP08637 254 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CST2P09228 141 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CHATP28329 748 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 RBP2P50120 134 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 MLF1P58340 268 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 ZNF468Q5VIY5 522 aaPredicted RBP13.25□□□□□ -0.29
DDX56-201ENST00000258772 ASCL4Q6XD76 172 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 LINC00518Q8N0U6 118 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 AGBL5Q8NDL9 886 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 AMDHD2Q9Y303 409 aa13.25□□□□□ -0.29
DDX56-201ENST00000258772 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 MASP2O00187 686 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 ZNF205O95201 554 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 FARS2O95363 451 aaKnown RBP13.24□□□□□ -0.29
DDX56-201ENST00000258772 CD5P06127 495 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 ZNF728P0DKX0 622 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 RAB11FIP2Q7L804 512 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 TOMM40LQ969M1 308 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 BORCS8Q96FH0 119 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 PARP11Q9NR21 331 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 ZNF175Q9Y473 711 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 C9J4A7 227 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 TERTO14746 1132 aaKnown RBP13.24□□□□□ -0.29
DDX56-201ENST00000258772 DNPH1O43598 174 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 CCL4P13236 92 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 TMEM187Q14656 261 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 SP6Q3SY56 376 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 OR2Y1Q8NGV0 311 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 GALNT14Q96FL9 552 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 NAA60Q9H7X0 242 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 TMEM38BQ9NVV0 291 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 SIT1Q9Y3P8 196 aa13.24□□□□□ -0.29
DDX56-201ENST00000258772 KLF2Q9Y5W3 355 aaPredicted RBP13.24□□□□□ -0.29
DDX56-201ENST00000258772 NSG1A0A0A6YYJ2 146 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 GEMIN2O14893 280 aaKnown RBP13.23□□□□□ -0.29
DDX56-201ENST00000258772 NRASP01111 189 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 ZNF32P17041 273 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 FAM3AP98173 230 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 TMEM42Q69YG0 159 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 LHFPL2Q6ZUX7 228 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 YRDCQ86U90 279 aaKnown RBP13.23□□□□□ -0.29
DDX56-201ENST00000258772 AKR7LQ8NHP1 331 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 CPT1CQ8TCG5 803 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 RTN4IP1Q8WWV3 396 aaPredicted RBP13.23□□□□□ -0.29
DDX56-201ENST00000258772 DYRK2Q92630 601 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 PLEKHA2Q9HB19 425 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 ZFP57Q9NU63 452 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 IGKV1-12A0A0C4DH73 117 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 OR6C6A6NF89 314 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 AGPAT2O15120 278 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 SCGB1D2O95969 90 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 IGKV1D-12P01611 117 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
DDX56-201ENST00000258772 HEXAP06865 529 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 OR5AC1P0C628 307 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 SFTA3P0C7M3 94 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 B4GALT1P15291 398 aa13.23□□□□□ -0.29
DDX56-201ENST00000258772 PRKACAP17612 351 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms