RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 KLRF1Q9NZS2 232 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SIGLEC7Q9Y286 467 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 TRBV24-1A0A075B6N3 115 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1W2PPC4 97 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 F5H5K5 113 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 GABARAPH6UMI1 98 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PYCARD-AS1I3L0S3 204 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 MPPED1O15442 326 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 DKK1O94907 266 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 FTH1P19P0C7X4 201 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 MYF5P13349 255 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 OR3A4PP47883 348 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 CX3CR1P49238 355 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SNU13P55769 128 aaKnown RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 RHOAP61586 193 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 MRPS34P82930 218 aaKnown RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 RGNQ15493 299 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 CSRP2Q16527 193 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 POU2AF1Q16633 256 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SLC25A52Q3SY17 297 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SPATA45Q537H7 98 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 WIPI1Q5MNZ9 446 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 LY6G6FQ5SQ64 297 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 RHBDD2Q6NTF9 364 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PAQR6Q6TCH4 344 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 FA2HQ7L5A8 372 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 GJD3Q8N144 294 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SLC39A11Q8N1S5 342 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF417Q8TAU3 575 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 VN1R17PQ8TDU5 208 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 C15orf40Q8WUR7 153 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ST8SIA1Q92185 356 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 COA7Q96BR5 231 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 BTF3L4Q96K17 158 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ACCSQ96QU6 501 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 POMKQ9H5K3 350 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 NPVFQ9HCQ7 196 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PRSS16Q9NQE7 514 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 JKAMPQ9P055 326 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SNX11Q9Y5W9 270 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 HEATR5AQ86XA9 2040 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 NUP205Q92621 2012 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PDCD11Q14690 1871 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 GLOD5A6NK44 160 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 H3BML4 177 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TNFSF14O43557 240 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 NRASP01111 189 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 MDH2P40926 338 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 PLP2Q04941 152 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF684Q5T5D7 378 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 CST9LP1Q5W188 147 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF66Q6ZN08 573 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 Q6ZRG5 221 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF595Q8IYB9 648 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TCEANCQ8N8B7 351 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 OR10Q1Q8NGQ4 319 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 C16orf52Q8NHV5 167 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 IMP4Q96G21 291 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 C1QTNF4Q9BXJ3 329 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 RAB9BQ9NP90 201 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SCN8AQ9UQD0 1980 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 IGHV2-26A0A0B4J1V2 119 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 PRR19A6NJB7 356 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 FAM166BA8MTA8 275 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 KIAA1324LA8MWY0 1029 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ETV2O00321 342 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 TAAR5O14804 337 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 HNRNPDLO14979 420 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SLC16A7O60669 478 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 RAMP2O60895 175 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 DIRAS1O95057 198 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 GPANK1O95872 356 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 HBZP02008 142 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 PMCHP20382 165 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SAT1P21673 171 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 MDKP21741 143 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 CHI3L1P36222 383 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 UQCRFS1P47985 274 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SULT1A2P50226 295 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 RRADP55042 308 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SUMO1P63165 101 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 FOXE3Q13461 319 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 UFSP1Q6NVU6 142 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ENPP7Q6UWV6 458 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF534Q76KX8 674 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ASCL5Q7RTU5 278 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 RTN4RL1Q86UN2 441 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 NEIL1Q96FI4 390 aaPredicted RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 UHRF2Q96PU4 802 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 NAA38Q9BRA0 125 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 SRD5A3Q9H8P0 318 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 ISG20L2Q9H9L3 353 aaKnown RBP6.79□□□□□ -1.32
GPNMB-201ENST00000258733 CYTL1Q9NRR1 136 aa6.79□□□□□ -1.32
GPNMB-201ENST00000258733 DKK4Q9UBT3 224 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms