RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OR5B3Q8NH48 314 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 PTP4A1Q93096 173 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 RPEQ96AT9 228 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 NRTNQ99748 197 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 CYTIPO60759 359 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 COMMD1Q8N668 190 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 AMMECR1Q9Y4X0 333 aaPredicted RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 URGCP-MRPS24S4R325 110 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 DCTN6O00399 190 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 FFAR1O14842 300 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 IGHA1P01876 353 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 AVPR2P30518 371 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 KIAA0141Q14154 515 aaPredicted RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 LOXL4Q96JB6 756 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 HES4Q9HCC6 221 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 FKBP11Q9NYL4 201 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 PRSS44E7EML9 344 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 FOXS1O43638 330 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 MPZL1O95297 269 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 KRASP01116 189 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 BMI1P35226 326 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 AKR1C3P42330 323 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 SPICQ8N5J4 248 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 COL4A1P02462 1669 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 CHEK1O14757 476 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 CD3EP07766 207 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 LIMK1P53667 647 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 ZXDAP98168 799 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 OR51I2Q9H344 312 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 MAP1BP46821 2468 aaKnown RBP16.8■□□□□ 0.28
PTPRE-201ENST00000254667 ETFRF1Q6IPR1 90 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 C6orf201Q7Z4U5 140 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 SMIM7Q9BQ49 75 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 TIMM9Q9Y5J7 89 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 A0A1B0GTH9 108 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 WNT1P04628 370 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 CTRB1P17538 263 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 PRRX1P54821 245 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 FAM162BQ5T6X4 162 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 CTRB2Q6GPI1 263 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 OR2M3Q8NG83 312 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 MED30Q96HR3 178 aa16.8■□□□□ 0.28
PTPRE-201ENST00000254667 QSER1Q2KHR3 1735 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 MAGEA5P43359 124 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 MPPED2Q15777 294 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 ADAM5Q6NVV9 412 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 OR10AD1Q8NGE0 317 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 OR4D11Q8NGI4 311 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 OR2T6Q8NHC8 308 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 RAB1CQ92928 201 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 CES1P1Q9UKY3 287 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 FGF2P09038 288 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 SLC16A12Q6ZSM3 486 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 LYG1Q8N1E2 194 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 RPUSD4Q96CM3 377 aaKnown RBP16.79■□□□□ 0.28
PTPRE-201ENST00000254667 PPIHO43447 177 aaKnown RBP16.79■□□□□ 0.28
PTPRE-201ENST00000254667 BGLAPP02818 100 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 LIFP15018 202 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 MPGP29372 298 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 MLF1P58340 268 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 SSTP61278 116 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 DCAF10Q5QP82 559 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.79■□□□□ 0.28
PTPRE-201ENST00000254667 RPL7L1Q6DKI1 246 aaKnown RBP16.79■□□□□ 0.28
PTPRE-201ENST00000254667 MOB3AQ96BX8 217 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 NAA60Q9H7X0 242 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 UQCC1Q9NVA1 299 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 RASL12Q9NYN1 266 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 CALCRP30988 508 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
PTPRE-201ENST00000254667 PLXNB2O15031 1838 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 CST4P01036 141 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 CCL3P10147 92 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 SLC25A4P12235 298 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 CEACAM3P40198 252 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 TUSC5Q8IXB3 177 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 C9orf40Q8IXQ3 194 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 RELL2Q8NC24 303 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-201ENST00000254667 ADTRPQ96IZ2 230 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 C3orf85A0A1B0GTC6 90 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 INSL4Q14641 139 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 C1QL3Q5VWW1 255 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 SSX8Q7RTT4 187 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 C20orf196Q8IYI0 205 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 CCL17Q92583 94 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF230Q9UIE0 474 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-201ENST00000254667 PSG11Q9UQ72 335 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 LPAR6P43657 344 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 RXFP4Q8TDU9 374 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 RND1Q92730 232 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 BARX1Q9HBU1 254 aaPredicted RBP16.78■□□□□ 0.28
PTPRE-201ENST00000254667 FZR1Q9UM11 496 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 MASP2O00187 686 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 HRKO00198 91 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 CTDSPLO15194 276 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 NGFRP08138 427 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 DHRS2Q13268 280 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 COL19A1Q14993 1142 aa16.78■□□□□ 0.28
PTPRE-201ENST00000254667 PDCD1Q15116 288 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms