RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 BAMBIQ13145 260 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 DEFB112Q30KQ8 113 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 PP6455Q8WZ26 134 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 LHX4Q969G2 390 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 C8orf4Q9NR00 106 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 F8VVB4 439 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 F8VWA3 439 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 LIMS3P0CW19 117 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 LIMS4P0CW20 117 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 PRTN3P24158 256 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 PRDX2P32119 198 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 CEBPDP49716 269 aaPredicted RBP18.89■□□□□ 0.61
LSM4-201ENST00000252816 BPIFB3P59826 476 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 ADARB1P78563 741 aaKnown RBP18.89■□□□□ 0.61
LSM4-201ENST00000252816 PDCD1Q15116 288 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 KLHL22Q53GT1 634 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 VMO1Q7Z5L0 202 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 EGFL6Q8IUX8 553 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 Q8N7P7 452 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 TMEM185AQ8NFB2 350 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 DMRTB1Q96MA1 342 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 FGF20Q9NP95 211 aaPredicted RBP18.89■□□□□ 0.61
LSM4-201ENST00000252816 MTCH1Q9NZJ7 389 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 HHLA2Q9UM44 414 aa18.89■□□□□ 0.61
LSM4-201ENST00000252816 IGHV1-69DA0A0B4J2H0 117 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 IGHV1-69P01742 117 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 DLX1P56177 255 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 PRB3Q04118 309 aaPredicted RBP18.88■□□□□ 0.61
LSM4-201ENST00000252816 CNN3Q15417 329 aaKnown RBP18.88■□□□□ 0.61
LSM4-201ENST00000252816 TTC23Q5W5X9 447 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 UTS2BQ765I0 119 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 PDZD9Q8IXQ8 264 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 KIR3DL3Q8N743 410 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 ZNF676Q8N7Q3 588 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 BORCS8Q96FH0 119 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 MYCBPQ99417 103 aaPredicted RBP18.88■□□□□ 0.61
LSM4-201ENST00000252816 JAM3Q9BX67 310 aa18.88■□□□□ 0.61
LSM4-201ENST00000252816 TMEM89A2RUT3 159 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 ZNF20P17024 532 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 ATF1P18846 271 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 SLC9A3R2Q15599 337 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 OGFRL1Q5TC84 451 aaPredicted RBP18.87■□□□□ 0.61
LSM4-201ENST00000252816 DHRSXQ8N5I4 330 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 DNAAF1Q8NEP3 725 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 OR13C3Q8NGS6 347 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 GATAD2BQ8WXI9 593 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 SLAMF9Q96A28 289 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 PRDM13Q9H4Q3 707 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 SIRT7Q9NRC8 400 aa18.87■□□□□ 0.61
LSM4-201ENST00000252816 CASQ2O14958 399 aaPredicted RBP18.86■□□□□ 0.61
LSM4-201ENST00000252816 INMTO95050 263 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 ZFPL1O95159 310 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 ETV1P50549 477 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 CAPZA1P52907 286 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 SLC25A26Q70HW3 274 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 CMTM4Q8IZR5 234 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 GCDHQ92947 438 aaPredicted RBP18.86■□□□□ 0.61
LSM4-201ENST00000252816 CEP19Q96LK0 163 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 PDCD1LG2Q9BQ51 273 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 OR14J1Q9UGF5 321 aa18.86■□□□□ 0.61
LSM4-201ENST00000252816 A0A1W2PQ09 198 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 CLDN34H7C241 214 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 KNG1P01042 644 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 AZGP1P25311 298 aaKnown RBP18.85■□□□□ 0.61
LSM4-201ENST00000252816 RBP2P50120 134 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 GTF2A1P52655 376 aaPredicted RBP18.85■□□□□ 0.61
LSM4-201ENST00000252816 MRPL28Q13084 256 aaKnown RBP18.85■□□□□ 0.61
LSM4-201ENST00000252816 RNF144BQ7Z419 303 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 ZNF561Q8N587 486 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 C19orf12Q9NSK7 152 aa18.85■□□□□ 0.61
LSM4-201ENST00000252816 TRBV23-1A0A0A0MS06 115 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 TMEM212A6NML5 194 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 SLC1A7O00341 560 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 RNASE1P07998 156 aaKnown RBP18.84■□□□□ 0.61
LSM4-201ENST00000252816 GNAO1P09471 354 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 PRKACBP22694 351 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 DCKP27707 260 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 COMPP49747 757 aaPredicted RBP18.84■□□□□ 0.61
LSM4-201ENST00000252816 GBX2P52951 348 aaPredicted RBP18.84■□□□□ 0.61
LSM4-201ENST00000252816 ATP1B3P54709 279 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 MTCP1P56278 107 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 XAF1Q6GPH4 301 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 C12orf54Q6X4T0 127 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 PIP4P2Q8N4L2 257 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 SETD9Q8NE22 299 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 OR5AK2Q8NH90 309 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 TNFRSF14Q92956 283 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 ZDHHC16Q969W1 377 aa18.84■□□□□ 0.61
LSM4-201ENST00000252816 ZMAT3Q9HA38 289 aaKnown RBP18.84■□□□□ 0.61
LSM4-201ENST00000252816 RNASEK-C17orf49H0YIS7 233 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 M0R1W7 72 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 HOXA3O43365 443 aaPredicted RBP18.83■□□□□ 0.6
LSM4-201ENST00000252816 CCDC159P0C7I6 412 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 CAPGP40121 348 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 NPBWR2P48146 333 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 POU3F4P49335 361 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 KLRD1Q13241 179 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 OR2G6Q5TZ20 316 aa18.83■□□□□ 0.6
LSM4-201ENST00000252816 METAP1DQ6UB28 335 aaPredicted RBP18.83■□□□□ 0.6
LSM4-201ENST00000252816 Q6YL49 198 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms