RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CDK5R1Q15078 307 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 PDCD1Q15116 288 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 DGUOKQ16854 277 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 LHFPL2Q6ZUX7 228 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 Q8IYB0 196 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 OR5T2Q8NGG2 359 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 OR51A4Q8NGJ6 313 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 OR5AK2Q8NH90 309 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 NPRL2Q8WTW4 380 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 CEP19Q96LK0 163 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 WDFY2Q96P53 400 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 RASSF4Q9H2L5 321 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 ZMAT3Q9HA38 289 aaKnown RBP10.56□□□□□ -0.72
VPREB3-201ENST00000248948 NEK6Q9HC98 313 aa10.56□□□□□ -0.72
VPREB3-201ENST00000248948 IGKV1-27A0A075B6S5 117 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 EFCAB10A6NFE3 127 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 E9PI62 339 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 SLC1A7O00341 560 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 TOX4O94842 621 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ALX3O95076 343 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 VENTXO95231 258 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 GNAO1P09471 354 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 IGHV4-38-2P0DP08 117 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 SELLP14151 372 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ATF1P18846 271 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 GABRA2P47869 451 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ETV1P50549 477 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ATP1B3P54709 279 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 RPL22L1Q6P5R6 122 aaKnown RBP10.55□□□□□ -0.72
VPREB3-201ENST00000248948 CMTM4Q8IZR5 234 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 FGFRL1Q8N441 504 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 OR10AC1Q8NH08 325 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 OR52N1Q8NH53 320 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 TFAP2CQ92754 450 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 FGGYQ96C11 551 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 SMIM19Q96E16 107 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 TMEM80Q96HE8 168 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF488Q96MN9 340 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 OPALINQ96PE5 141 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 TBX15Q96SF7 602 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 C19orf24Q9BVV8 132 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 MS4A7Q9GZW8 240 aaPredicted RBP10.55□□□□□ -0.72
VPREB3-201ENST00000248948 VCX3BQ9H321 246 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ZNF69Q9UC07 566 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 NKX1-2Q9UD57 310 aaPredicted RBP10.55□□□□□ -0.72
VPREB3-201ENST00000248948 DHDHQ9UQ10 334 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 ANK2Q01484 3957 aa10.55□□□□□ -0.72
VPREB3-201ENST00000248948 TRBV2A0A0J9YWF9 115 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 TRIM77I1YAP6 450 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 SULT1B1O43704 296 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 CYB5AP00167 134 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 SFTPBP07988 381 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 OCM2P0CE71 109 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 OCMP0CE72 109 aaPredicted RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 METAP1DQ6UB28 335 aaPredicted RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 FIP1L1Q6UN15 594 aaKnown RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 RBMS3Q6XE24 437 aaKnown RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 SLC25A26Q70HW3 274 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 ANGPTL5Q86XS5 388 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 PARP16Q8N5Y8 322 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 TMEM185AQ8NFB2 350 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 OR13C9Q8NGT0 318 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 TSEN15Q8WW01 171 aaKnown RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 H1FXQ92522 213 aaKnown RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 CPNE2Q96FN4 548 aaPredicted RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 PCGF1Q9BSM1 259 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 FAM234AQ9H0X4 552 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 CNTD2Q9H8S5 307 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 PLCXD1Q9NUJ7 323 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
VPREB3-201ENST00000248948 MAB21L2Q9Y586 359 aa10.54□□□□□ -0.72
VPREB3-201ENST00000248948 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 M0R1W7 72 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 CD2P06729 351 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 NDUFB7P17568 137 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 MTCP1P56278 107 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 TAS2R43P59537 309 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 SRSF2Q01130 221 aaKnown RBP10.53□□□□□ -0.72
VPREB3-201ENST00000248948 OR2G6Q5TZ20 316 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 LAIR2Q6ISS4 152 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 MKXQ8IYA7 352 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 ZNRF1Q8ND25 227 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 FAM216AQ8WUB2 273 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 C22orf15Q8WYQ4 148 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 SLAMF9Q96A28 289 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 SEBOXQ9HB31 216 aaPredicted RBP10.53□□□□□ -0.72
VPREB3-201ENST00000248948 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 MTCH1Q9NZJ7 389 aa10.53□□□□□ -0.72
VPREB3-201ENST00000248948 ONECUT1Q9UBC0 465 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms