RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OPALINQ96PE5 141 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 SSBP3Q9BWW4 388 aaPredicted RBP9.43□□□□□ -0.9
SF3B6-201ENST00000233468 BEX2Q9BXY8 128 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 SHARPINQ9H0F6 387 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 LPAR2Q9HBW0 351 aa9.43□□□□□ -0.9
SF3B6-201ENST00000233468 A8MXK9 166 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 AKR7A2O43488 359 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 ADAM20O43506 726 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 PLPP2O43688 288 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 SULT1B1O43704 296 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 ECDO95905 644 aaPredicted RBP9.42□□□□□ -0.9
SF3B6-201ENST00000233468 IFNA2P01563 188 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 CELP19835 753 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 MPZP25189 248 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 AZGP1P25311 298 aaKnown RBP9.42□□□□□ -0.9
SF3B6-201ENST00000233468 GABARAPL2P60520 117 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 GPR50Q13585 617 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 MED22Q15528 200 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 Q499Y3 187 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 ARSJQ5FYB0 599 aaPredicted RBP9.42□□□□□ -0.9
SF3B6-201ENST00000233468 DCAF12L2Q5VW00 463 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 BTNL3Q6UXE8 466 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 POC1AQ8NBT0 407 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF485Q8NCK3 441 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 OR51A4Q8NGJ6 313 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 NPRL2Q8WTW4 380 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 METTL17Q9H7H0 456 aaPredicted RBP9.42□□□□□ -0.9
SF3B6-201ENST00000233468 NLKQ9UBE8 527 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 KAAG1Q9UBP8 84 aa9.42□□□□□ -0.9
SF3B6-201ENST00000233468 POLR3KQ9Y2Y1 108 aaPredicted RBP9.42□□□□□ -0.9
SF3B6-201ENST00000233468 TMPRSS2O15393 492 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 NDUFB3O43676 98 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 NXPH2O95156 264 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 GYPAP02724 150 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 HCKP08631 526 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 PGA5P0DJD9 388 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 SOX2P48431 317 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 LCN2P80188 198 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 TRAM1Q15629 374 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 KRTAP24-1Q3LI83 254 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 LRRC10Q5BKY1 277 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 ATPAF1Q5TC12 328 aaPredicted RBP9.41□□□□□ -0.9
SF3B6-201ENST00000233468 XAF1Q6GPH4 301 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 FAHD2BQ6P2I3 314 aaPredicted RBP9.41□□□□□ -0.9
SF3B6-201ENST00000233468 IL17RELQ6ZVW7 336 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 OR13C9Q8NGT0 318 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 OR10AC1Q8NH08 325 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 UFD1Q92890 307 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM106AQ96A25 262 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 FAHD2AQ96GK7 314 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
SF3B6-201ENST00000233468 RHOFQ9HBH0 211 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 ISYNA1Q9NPH2 558 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 GLS2Q9UI32 602 aa9.41□□□□□ -0.9
SF3B6-201ENST00000233468 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 IGHV3OR15-7A0A075B7D8 119 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 RHBDL1O75783 438 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 LALBAP00709 142 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 LIPFP07098 398 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 FAM157CP0CG43 387 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 EGR1P18146 543 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 PSMA1P25786 263 aaKnown RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 SRP14P37108 136 aaKnown RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 BMXP51813 675 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 GMFBP60983 142 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 IL13RA1P78552 427 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 IRF3Q14653 427 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 CR1LQ2VPA4 569 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 DMRTC1Q5HYR2 192 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 WDR25Q64LD2 544 aaPredicted RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 ANGPTL5Q86XS5 388 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 C19orf18Q8NEA5 215 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 PGLYRP3Q96LB9 341 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 CEP19Q96LK0 163 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 GPER1Q99527 375 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 NRIP2Q9BQI9 281 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 MRI1Q9BV20 369 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 PCDHB16Q9NRJ7 776 aa9.4□□□□□ -0.9
SF3B6-201ENST00000233468 PAK1IP1Q9NWT1 392 aaPredicted RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 SIRT4Q9Y6E7 314 aaPredicted RBP9.4□□□□□ -0.9
SF3B6-201ENST00000233468 IGKV1-9A0A0C4DH69 117 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 TRBV5-5A0A0J9YX44 114 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 PNMA8CA0A1B0GUJ8 204 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ZNF879B4DU55 563 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 TNFRSF13BO14836 293 aaPredicted RBP9.39□□□□□ -0.91
SF3B6-201ENST00000233468 SYNGR1O43759 233 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ENSAO43768 121 aaKnown RBP9.39□□□□□ -0.91
SF3B6-201ENST00000233468 KNG1P01042 644 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 ALDOBP05062 364 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 GABRA2P47869 451 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 POU3F4P49335 361 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 MLLT11Q13015 90 aaPredicted RBP9.39□□□□□ -0.91
SF3B6-201ENST00000233468 PDZK1IP1Q13113 114 aa9.39□□□□□ -0.91
SF3B6-201ENST00000233468 KISS1Q15726 138 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms