RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SPRY1O43609 319 aaPredicted RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 TIAF1O95411 115 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 IGLV3-1P01715 115 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 S100A8P05109 93 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 S100A9P06702 114 aaKnown RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 CTSDP07339 412 aaPredicted RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 LMO1P25800 156 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 ALDH3B1P43353 468 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 FXYD4P59646 89 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CCL20P78556 96 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 TAF9Q16594 264 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 TMEM176BQ3YBM2 270 aaPredicted RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 NSUN5P2Q63ZY6 315 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 OGFOD3Q6PK18 319 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 SLC16A14Q7RTX9 510 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 ANKRD37Q7Z713 158 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 LURAP1LQ8IV03 231 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 PLPP5Q8NEB5 264 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 OR11L1Q8NGX0 322 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 PIGQQ9BRB3 760 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 TM2D1Q9BX74 207 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CHRDQ9H2X0 955 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 C19orf12Q9NSK7 152 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 PISDQ9UG56 409 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 ANXA10Q9UJ72 324 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CCDC187A0A096LP49 1063 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 ETV2O00321 342 aaPredicted RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 PPIHO43447 177 aaKnown RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 PNLIPP16233 465 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 GLP1RP43220 463 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CAMLGP49069 296 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CLDN17P56750 224 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 CHAF1BQ13112 559 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 TMEM187Q14656 261 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 PDCD1Q15116 288 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 SNAI3Q3KNW1 292 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 OR6X1Q8NH79 312 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 ZNF837Q96EG3 531 aaPredicted RBP10.82□□□□□ -0.68
NUP88-201ENST00000225696 ZNF160Q9HCG1 818 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 GPR173Q9NS66 373 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 AK3Q9UIJ7 227 aa10.82□□□□□ -0.68
NUP88-201ENST00000225696 IGKV1-27A0A075B6S5 117 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 IGHV3-15A0A0B4J1V0 119 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 LMO7DNF2Z398 122 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 ATXN7O15265 892 aaPredicted RBP10.81□□□□□ -0.68
NUP88-201ENST00000225696 GPR37O15354 613 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 OR2J2O76002 312 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 IFNA21P01568 189 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 IGHV2-70P01814 119 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 LTBRP36941 435 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 CDPF1Q6NVV7 123 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 C5orf24Q7Z6I8 188 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 OR5L1Q8NGL2 311 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 OR2AE1Q8NHA4 323 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 HAS2Q92819 552 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 MRGPRX4Q96LA9 322 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 Q96M66 194 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 WDR77Q9BQA1 342 aaPredicted RBP10.81□□□□□ -0.68
NUP88-201ENST00000225696 GINS3Q9BRX5 216 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 SDHAF3Q9NRP4 125 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 DECR2Q9NUI1 292 aa10.81□□□□□ -0.68
NUP88-201ENST00000225696 IFITM10A6NMD0 228 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 DHRS3O75911 302 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 PRH1P02810 166 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 CSNK1A1P48729 337 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 SUMO3P55854 103 aaPredicted RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 RPS23P62266 143 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 ENDOGQ14249 297 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 TMEM182Q6ZP80 229 aaPredicted RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 Q6ZPA2 131 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 RTN4IP1Q8WWV3 396 aaPredicted RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 CHST5Q9GZS9 411 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 TUBA4BQ9H853 241 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 B3GALT1Q9Y5Z6 326 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 V9GYS6 101 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 ZNF850A8MQ14 1090 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 E5RGE8 158 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 RRP8O43159 456 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 YIF1AO95070 293 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 SEC11BP0C7V7 166 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 P2RY1P47900 373 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 CSNK1EP49674 416 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 GRB2P62993 217 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 SLC35A1P78382 337 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 KCNMB1Q16558 191 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 PRAMEF20Q5VT98 475 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 TDHQ8IZJ6 230 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 WDSUB1Q8N9V3 476 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 RNF138Q8WVD3 245 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 JSRP1Q96MG2 331 aaPredicted RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 OXGR1Q96P68 337 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 ZNF385AQ96PM9 386 aaKnown RBP10.8□□□□□ -0.68
NUP88-201ENST00000225696 S100A13Q99584 98 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 OR51M1Q9H341 326 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 METTL7AQ9H8H3 244 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 PLEKHA2Q9HB19 425 aa10.8□□□□□ -0.68
NUP88-201ENST00000225696 NSG2Q9Y328 171 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms