RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR5AP2Q8NGF4 316 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 FAAP24Q9BTP7 215 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 OR51I2Q9H344 312 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
SMPD3-201ENST00000219334 DOCK1Q14185 1865 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 AKR7A2O43488 359 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 CD37P11049 281 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 PNLIPP16233 465 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 MPGP29372 298 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 FAM162BQ5T6X4 162 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 HEXA-AS1Q9H8Q6 139 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 C1RLQ9NZP8 487 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 OR3A1P47881 315 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 MOGAT1Q96PD6 335 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 SNCGO76070 127 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 CCL3P10147 92 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 OR2M7Q8NG81 312 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF275Q9NSD4 429 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-201ENST00000219334 CST7O76096 145 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 DUS4LO95620 317 aaKnown RBP16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ANKRD34CP0C6C1 535 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF17P17021 662 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 MMP15P51511 669 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 DGAT2L6Q6ZPD8 337 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ADTRPQ96IZ2 230 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF629Q9UEG4 869 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-201ENST00000219334 PCOLCE2Q9UKZ9 415 aa16.81■□□□□ 0.28
SMPD3-201ENST00000219334 ZFPL1O95159 310 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 PDGFAP04085 211 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 FTH1P19P0C7X4 201 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 TGFBR1P36897 503 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 GLCCI1Q86VQ1 547 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 SFTPA2Q8IWL1 248 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 OR13D1Q8NGV5 346 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 YIPF6Q96EC8 236 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 OR2D2Q9H210 308 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 UQCC1Q9NVA1 299 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 GAR1Q9NY12 217 aaKnown RBP16.8■□□□□ 0.28
SMPD3-201ENST00000219334 LIPT2A6NK58 231 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 LANCL1O43813 399 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 OR2C1O95371 312 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 LGALS7P47929 136 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 PPP1R1CQ8WVI7 109 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 ASB10Q8WXI3 467 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 CLCF1Q9UBD9 225 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 A0A1W2PQF6 199 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 SP1P08047 785 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 CALCRP30988 508 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 ADAM5Q6NVV9 412 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 RXFP4Q8TDU9 374 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 ASB13Q8WXK3 278 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 C14orf79Q96F83 325 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 HSD17B10Q99714 261 aaKnown RBP16.8■□□□□ 0.28
SMPD3-201ENST00000219334 VSTM2LQ96N03 204 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 SLC25A32Q9H2D1 315 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 LSM2Q9Y333 95 aaKnown RBP16.8■□□□□ 0.28
SMPD3-201ENST00000219334 TMED3Q9Y3Q3 217 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 RHOBP62745 196 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 SP6Q3SY56 376 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 SSX8Q7RTT4 187 aa16.8■□□□□ 0.28
SMPD3-201ENST00000219334 PGA3P0DJD8 388 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 NTF3P20783 257 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 PCMT1P22061 227 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 FCER1GP30273 86 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 VSTM2AQ8TAG5 236 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 RNF7Q9UBF6 113 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 DCTN6O00399 190 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 SPP1P10451 314 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 LSM6P62312 80 aaKnown RBP16.79■□□□□ 0.28
SMPD3-201ENST00000219334 C6orf201Q7Z4U5 140 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 NECAP1Q8NC96 275 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 KCNMB2Q9Y691 235 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 KIAA0141Q14154 515 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-201ENST00000219334 OR52L2PQ8NGH6 319 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF230Q9UIE0 474 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF260Q3ZCT1 412 aa16.79■□□□□ 0.28
SMPD3-201ENST00000219334 ASPDHA6ND91 283 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 CLDN20P56880 219 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 MRPS11P82912 194 aaKnown RBP16.78■□□□□ 0.28
SMPD3-201ENST00000219334 MOGAT3Q86VF5 341 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 CST2P09228 141 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 CD226Q15762 336 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF764Q96H86 408 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-201ENST00000219334 RHNO1Q9BSD3 238 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 NTN4Q9HB63 628 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 SIRT3Q9NTG7 399 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-201ENST00000219334 PLPP2O43688 288 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 MPZL1O95297 269 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 PSG6Q00889 435 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 LINC00303Q3SY05 128 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 ZNF705AQ6ZN79 300 aaPredicted RBP16.78■□□□□ 0.28
SMPD3-201ENST00000219334 Q6ZNX1 250 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 ASCL5Q7RTU5 278 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 RASL11BQ9BPW5 248 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 ARPC4-TTLL3A0A0A6YYG9 625 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 TMEM272A0A1B0GTI8 110 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 SLC37A1P57057 533 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 MSRB3Q8IXL7 192 aa16.78■□□□□ 0.28
SMPD3-201ENST00000219334 TCRBV16S1A1N1A0A5B0 115 aa16.77■□□□□ 0.28
SMPD3-201ENST00000219334 TOX4O94842 621 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms