RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
SIX4-201ENST00000216513 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 IGKV1-8A0A0C4DH67 115 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 AQP8O94778 261 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 RPS4XP62701 263 aaKnown RBP12.12□□□□□ -0.47
SIX4-201ENST00000216513 PLPPR5Q32ZL2 321 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 SPSB2Q99619 263 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 TMEM208Q9BTX3 173 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 OR2H1Q9GZK4 316 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 HRH1P35367 487 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 ACSM1Q08AH1 577 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 ZNF665Q9H7R5 613 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 ST8SIA5O15466 376 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 OIP5O43482 229 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 TBX19O60806 448 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 CLDN14O95500 239 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 GYPAP02724 150 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 TAS2R30P59541 319 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 SRPXP78539 464 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 CD276Q5ZPR3 534 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 TMEM123Q8N131 208 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 CSAG2Q9Y5P2 127 aa12.12□□□□□ -0.47
SIX4-201ENST00000216513 OPN1MWP04001 364 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 OPN1MW2P0DN77 364 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 OPN1MW3P0DN78 364 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 CTLA4P16410 223 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 CEACAM6P40199 344 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 CADM3Q8N126 398 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 ZMIZ1Q9ULJ6 1067 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ZNF785A8K8V0 405 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ZG16O60844 167 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 PRSS35Q8N3Z0 413 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ETV7Q9Y603 341 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 MTNR1BP49286 362 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 CREB3L2Q70SY1 520 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 OR2G2Q8NGZ5 317 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 OR10J4P0C629 311 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 AADACP22760 399 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ACAA2P42765 397 aaKnown RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 NDUFA6P56556 154 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 HBG1P69891 147 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 HBG2P69892 147 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 ADIRFQ15847 76 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 SP6Q3SY56 376 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 MUC20Q8N307 709 aaPredicted RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 MUC15Q8N387 334 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 UPK3AO75631 287 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 DHRS3O75911 302 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 CD3DP04234 171 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 FCGR2CP31995 323 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 EIF4EBP2Q13542 120 aaPredicted RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 ZNF239Q16600 458 aaKnown RBP12.11□□□□□ -0.47
SIX4-201ENST00000216513 BAK1Q16611 211 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 Q6ZRG5 221 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 PP6455Q8WZ26 134 aa12.11□□□□□ -0.47
SIX4-201ENST00000216513 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 LY6EQ16553 131 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 NMES1Q9C002 83 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 SLC39A9Q9NUM3 307 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 SIGLEC7Q9Y286 467 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 CACNA1BQ00975 2339 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 C19orf67A6NJJ6 358 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 PPP3CBP16298 524 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 CSN1S1P47710 185 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 LGALS7P47929 136 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 DLL4Q9NR61 685 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 TMEM38BQ9NVV0 291 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 TMEM8BA6NDV4 472 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 APELAP0DMC3 54 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 DTYMKP23919 212 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 KIAA0040Q15053 153 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 OR4Q3Q8NH05 313 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 TAAR6Q96RI8 345 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 RIMKLAQ8IXN7 391 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 ARPC5LQ9BPX5 153 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 IGKV3-7A0A075B6H7 116 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 CST2P09228 141 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 CDKN2AP42771 156 aaKnown RBP12.1□□□□□ -0.47
SIX4-201ENST00000216513 MARCH1Q8TCQ1 289 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
SIX4-201ENST00000216513 PLAC1Q9HBJ0 212 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 PARD6AQ9NPB6 346 aa12.1□□□□□ -0.47
SIX4-201ENST00000216513 CELA3AP09093 270 aa12.09□□□□□ -0.47
SIX4-201ENST00000216513 ZXDCQ2QGD7 858 aaPredicted RBP12.09□□□□□ -0.47
SIX4-201ENST00000216513 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms