RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.44
UPK3A-201ENST00000216211 DIMT1Q9UNQ2 313 aaKnown RBP12.32□□□□□ -0.44
UPK3A-201ENST00000216211 TGP01266 2768 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 NKX6-3A6NJ46 265 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 TMEM210A6NLX4 147 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 RNASEK-C17orf49H0YIS7 233 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 GPR37O15354 613 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 CST4P01036 141 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 HTR1FP30939 366 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 HCCSP53701 268 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 PSMA6P60900 246 aaKnown RBP12.31□□□□□ -0.44
UPK3A-201ENST00000216211 TAF9Q16594 264 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ANKRD13BQ86YJ7 626 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 GID4Q8IVV7 300 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ZDHHC23Q8IYP9 409 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF454Q8N9F8 522 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 OR52I1Q8NGK6 324 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 RAB2BQ8WUD1 216 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 LGALS12Q96DT0 336 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 DPAGT1Q9H3H5 408 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ABCB9Q9NP78 766 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 H2AFY2Q9P0M6 372 aaPredicted RBP12.31□□□□□ -0.44
UPK3A-201ENST00000216211 ZNRD1Q9P1U0 126 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 LRP12Q9Y561 859 aa12.31□□□□□ -0.44
UPK3A-201ENST00000216211 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 FBP1P09467 338 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 DCTDP32321 178 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 GPM6AP51674 278 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 RPS7P62081 194 aaKnown RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 DGUOKQ16854 277 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 MIDNQ504T8 468 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 SLC35D3Q5M8T2 416 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 METAP1DQ6UB28 335 aaPredicted RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 GDPGP1Q6ZNW5 385 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF367Q7RTV3 350 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 KRT77Q7Z794 578 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 PNKDQ8N490 385 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 ANGPTL6Q8NI99 470 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 C8orf46Q8TAG6 207 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 NPRL2Q8WTW4 380 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 RNFT2Q96EX2 444 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 DMRTB1Q96MA1 342 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 TSC22D3Q99576 134 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 FUNDC2Q9BWH2 189 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 SLC25A10Q9UBX3 287 aaPredicted RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 ENPP5Q9UJA9 477 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 EXOGQ9Y2C4 368 aaKnown RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 CAB39Q9Y376 341 aaPredicted RBP12.3□□□□□ -0.44
UPK3A-201ENST00000216211 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
UPK3A-201ENST00000216211 H3BMQ9 156 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 PSMD9O00233 223 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NPFFO15130 113 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 RHBDL1O75783 438 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 CLPXO76031 633 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NDUFB7P17568 137 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 ALOX5APP20292 161 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 SLC2A5P22732 501 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 GLRA1P23415 457 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 PSMB9P28065 219 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 GABRA2P47869 451 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 PROK1P58294 105 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 DMRTC1Q5HYR2 192 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 CEP78Q5JTW2 689 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 Q6ZSV7 163 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 MEPCEQ7L2J0 689 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NANOGP1Q8N7R0 232 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 MED30Q96HR3 178 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 HIST1H2AAQ96QV6 131 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NIPAL2Q9H841 368 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
UPK3A-201ENST00000216211 WARS2Q9UGM6 360 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 LSM2Q9Y333 95 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 EXOSC1Q9Y3B2 195 aaKnown RBP12.29□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF816-ZNF321PA0A0X1KG74 233 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 A0A1W2PQ09 198 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 MEIOCA2RUB1 952 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 OR2AT4A6NND4 320 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF732B4DXR9 585 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 M0QZ24 198 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 TIMM23O14925 209 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 SIGLEC5O15389 551 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 MRPL3P09001 348 aaKnown RBP12.28□□□□□ -0.44
UPK3A-201ENST00000216211 ACAA1P09110 424 aaPredicted RBP12.28□□□□□ -0.44
UPK3A-201ENST00000216211 MAP2K3P46734 347 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 DHRS7BQ6IAN0 325 aaPredicted RBP12.28□□□□□ -0.44
UPK3A-201ENST00000216211 ASPHD2Q6ICH7 369 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
UPK3A-201ENST00000216211 ZSCAN4Q8NAM6 433 aaPredicted RBP12.28□□□□□ -0.44
UPK3A-201ENST00000216211 MND1Q9BWT6 205 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms