RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 RPEQ96AT9 228 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 GAL3ST2Q9H3Q3 398 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 CDC42EP2O14613 210 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 PRSS23O95084 383 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 ZP3P21754 424 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 ZNF230Q9UIE0 474 aaPredicted RBP12.06□□□□□ -0.48
SF3A1-201ENST00000215793 TMEM265A0A087WTH1 108 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 SH2D7A6NKC9 451 aaPredicted RBP12.06□□□□□ -0.48
SF3A1-201ENST00000215793 ONECUT2O95948 504 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 OR5C1Q8NGR4 320 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 LAMB1P07942 1786 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 A0A1W2PQD3 144 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 ZNF785A8K8V0 405 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 CLDN34H7C241 214 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 MPC2O95563 127 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 FAHD2BQ6P2I3 314 aaPredicted RBP12.06□□□□□ -0.48
SF3A1-201ENST00000215793 PRSS54Q6PEW0 395 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 FAHD2AQ96GK7 314 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 PSG11Q9UQ72 335 aa12.06□□□□□ -0.48
SF3A1-201ENST00000215793 hADV38S2A0JD32 116 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 CT62P0C5K7 136 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 RAB32Q13637 225 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 HLXQ14774 488 aaPredicted RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 PDCD1Q15116 288 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 DMKNQ6E0U4 476 aaPredicted RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 BTLAQ7Z6A9 289 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 C20orf196Q8IYI0 205 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 MOGAT1Q96PD6 335 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 IGHA1P01876 353 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 C1QAP02745 245 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 COL9A1P20849 921 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 INSL4Q14641 139 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 HFEQ30201 348 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 C1orf53Q5VUE5 145 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 OR4F17Q8NGA8 305 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 A0A1W2PN81 502 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 SLC6A1P30531 599 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 CHRNA7P36544 502 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 SURF2Q15527 256 aaPredicted RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 UBALD1Q8TB05 177 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 TMEM147Q9BVK8 224 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 ICAM5Q9UMF0 924 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 ITGB4P16144 1822 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 ANKRD20A5PA0PJZ0 165 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 PPP1CAP62136 330 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 FOXC1Q12948 553 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 SSX7Q7RTT5 188 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 SF3B5Q9BWJ5 86 aaKnown RBP12.05□□□□□ -0.48
SF3A1-201ENST00000215793 FAM60AQ9NP50 221 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 IL36GQ9NZH8 169 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 TAF1P21675 1872 aa12.05□□□□□ -0.48
SF3A1-201ENST00000215793 LOC102723971A0A1B0GUV8 181 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 KRTDAPP60985 99 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 LSM6P62312 80 aaKnown RBP12.04□□□□□ -0.48
SF3A1-201ENST00000215793 ATP6V1FQ16864 119 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 THYN1Q9P016 225 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 MAP1LC3B2A6NCE7 125 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 SNCGO76070 127 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-201ENST00000215793 PCMT1P22061 227 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 CSF2RBP32927 897 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 GALNSP34059 522 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 OPRK1P41145 380 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 OR3A4PP47883 348 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 KLF3P57682 345 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-201ENST00000215793 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 SEBOXQ9HB31 216 aaPredicted RBP12.04□□□□□ -0.48
SF3A1-201ENST00000215793 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 A0A1B0GTH9 108 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 HMSDA8MTL9 139 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 Q3ZCU0 254 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 DUSP18Q8NEJ0 188 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 LRRC29Q8WV35 223 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 ADTRPQ96IZ2 230 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 C12orf57Q99622 126 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 CD160O95971 181 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 RBP4P02753 201 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 CALCRP30988 508 aa12.04□□□□□ -0.48
SF3A1-201ENST00000215793 MVDP53602 400 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms