RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 G6PCP35575 357 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 FAM3AP98173 230 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF766Q5HY98 468 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 MCM3APO60318 1980 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 TRGV5A0A0B4J1U4 118 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 NGFP01138 241 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 DYNLT3P51808 116 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 DHODHQ02127 395 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 OR1K1Q8NGR3 316 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 IGHV3OR15-7A0A075B7D8 119 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 PTGFRP43088 359 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 TAS2R45P59539 299 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 ORM2P19652 201 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 MYPOPQ86VE0 399 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 TCTE3Q8IZS6 198 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 MTCH2Q9Y6C9 303 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 ARRDC5A6NEK1 342 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 VAMP5O95183 116 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 CSN3P07498 182 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 HIST1H3AP68431 136 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 OCIAD1Q9NX40 245 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 IL20Q9NYY1 176 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 CACNG5Q9UF02 275 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 BCORQ6W2J9 1755 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 SOCS1O15524 211 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 LIMS3P0CW19 117 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 LIMS4P0CW20 117 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 BCL3P20749 454 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 CAMPP49913 170 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 ZAR1Q86SH2 424 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 NUBPLQ8TB37 319 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 PLEKHA2Q9HB19 425 aa12.11□□□□□ -0.47
TGFBR3-201ENST00000212355 LY86O95711 162 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 CCR5P51681 352 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 PMS2P11Q13670 270 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 GGNBP1Q5YKI7 109 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 PWWP2BQ6NUJ5 590 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF586Q9NXT0 402 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 HIST1H1DP16402 221 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 POLR2GP62487 172 aaKnown RBP eCLIP12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 TGIF2LYQ8IUE0 185 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 RAB35Q15286 201 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 KIAA1217Q5T5P2 1943 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 TRGV10A0A0A0MS01 117 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 NDUFB6O95139 128 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 FAM53BQ14153 422 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 CD226Q15762 336 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 FFAR1O14842 300 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 PPP1CBP62140 327 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF485Q8NCK3 441 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
TGFBR3-201ENST00000212355 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 THBS4P35443 961 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 BPIFB3P59826 476 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF574Q6ZN55 896 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 TMEM9BQ9NQ34 198 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 LSM2Q9Y333 95 aaKnown RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 OR5H1A6NKK0 313 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 LANCL1O43813 399 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 ADH4P08319 380 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 CBLN2Q8IUK8 224 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF737O75373 536 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 MDKP21741 143 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 S100A7P31151 101 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF154Q13106 437 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 CAMKMTQ7Z624 323 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 WDR31Q8NA23 367 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 OR1B1Q8NGR6 318 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 MAFAQ8NHW3 353 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 PLPP3O14495 311 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 PRSS23O95084 383 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 HPP00738 406 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 SMIM21Q3B7S5 101 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 RFLNBQ8N5W9 214 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 OR2T6Q8NHC8 308 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 PRRX2Q99811 253 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 HDHD3Q9BSH5 251 aaPredicted RBP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 A0A1W2PPE3 182 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 ACTL6AO96019 429 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 FAM78BQ5VT40 261 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 P4HTMQ9NXG6 502 aa12.09□□□□□ -0.47
TGFBR3-201ENST00000212355 FRRS1LQ9P0K9 344 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms