RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fbxw22Q5XG67 466 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Rasgef1bQ8JZL7 473 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Olfr780Q8VEU0 312 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Exosc4Q921I9 245 aaKnown RBP13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tnk1Q99ML2 666 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tm7sf3Q9CRG1 565 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Tssk4Q9D411 328 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Adam28Q9JLN6 793 aa13.96□□□□□ -0.17
Trim39-203ENSMUST00000113706 Gm3099J3QPA5 205 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 HckP08103 524 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Hmga2P52927 108 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Snai2P97469 269 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Nkain3Q3URJ8 181 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 St6gal2Q76K27 524 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tnfsfm13Q8BXS2 410 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 LgalslQ8VED9 172 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr186Q8VEX5 309 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tex12Q9CR81 123 aa13.96□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn2r124K7N789 855 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Il5raP21183 415 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 GipP48756 144 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 P58686 83 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ear2P97425 156 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 McptlQ00356 246 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 FRRS1Q8K385 592 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mob1aQ921Y0 216 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Polg2Q9QZM2 459 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 D17h6s53eQ9Z1R4 293 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tsc22d3Q9Z2S7 137 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cacna1gQ5SUF7 2381 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1109A2AT96 312 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 IqckD3YYL3 290 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm8220F6YKI2 213 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Fam180aQ8BR21 173 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Nkx6-1Q99MA9 365 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tpra1Q99MU1 369 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Dph7Q9CYU6 477 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tomm20Q9DCC8 145 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 GltpQ9JL62 209 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 Anxa10Q9QZ10 324 aa13.95□□□□□ -0.18
Trim39-203ENSMUST00000113706 6430628N08RikA0A0U1RQ45 177 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tex38A2A8T7 201 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Dgat2l6A2ADU8 337 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 4930402F06RikA2AUQ8 332 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm21981D3Z6Q6 369 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 S1pr1O08530 382 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Rbbp9O88851 186 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Zfp11P10751 647 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Sftpa1P35242 248 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Il18P70380 192 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Slc17a1Q61983 465 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Pcp4l1Q6W8Q3 68 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 GnalQ8CGK7 381 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 AfmidQ8K4H1 305 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn1r21Q8R2C6 297 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Phospho1Q8R2H9 267 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mfsd6lQ8R3N2 586 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ppp1r14cQ8R4S0 164 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Thap7Q8VCZ3 309 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lamtor1Q9CQ22 161 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Syt13Q9EQT6 426 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tsga8Q9JJL0 238 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 BptfA2A654 3036 aaKnown RBP13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Il9rQ01114 468 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Q149G0 166 aaKnown RBP13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Opa3Q505D7 179 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 GcsamQ6RFH4 181 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Fam57bQ7TNV1 275 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Sla2Q8R4L0 259 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 B3galnt1Q920V1 331 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Emc9Q9DB76 206 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Zbtb32Q9JKD9 465 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 RbpmsQ9WVB0 197 aaKnown RBP13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1221L7MU53 311 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Klf9O35739 244 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 AcheP21836 614 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1162Q7TR28 314 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Mitd1Q8VDV8 249 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ubl7Q91W67 380 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lin37Q9D8N6 246 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Tprg1lQ9DBS2 266 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Lhx2Q9Z0S2 406 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Med13Q5SWW4 2171 aa13.94□□□□□ -0.18
Trim39-203ENSMUST00000113706 Gm21560D3Z7A4 205 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 4930555G01RikL7N253 205 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ear3O35290 156 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Pnliprp2P17892 482 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Sstr2P30875 369 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Ikzf2P81183 526 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Grb2Q60631 217 aaKnown RBP13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Phf21aQ6ZPK0 659 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Cpne4Q8BLR2 557 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Acer1Q8R4X1 273 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Hyal1Q91ZJ9 462 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 SmpxQ9DC77 85 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 GrinaQ9ESF4 345 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Dock9Q8BIK4 2055 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Olfr1055A2AVX9 346 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Vmn2r108E9PYS0 855 aa13.93□□□□□ -0.18
Trim39-203ENSMUST00000113706 Igf2P09535 180 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms