RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 1700066B19RikQ3TS39 127 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr98Q8VFD9 309 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Pofut1Q91ZW2 393 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Znf281Q99LI5 893 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mrm2Q9CPY0 246 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mid1ip1Q9CQ20 182 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Nsa2Q9CR47 260 aaKnown RBP9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Dusp3Q9D7X3 185 aa9.22□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Scgb1b12A0A087WP21 93 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1158A2BHP7 313 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Dscr3O35075 297 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Id1P20067 168 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 CryabP23927 175 aaKnown RBP9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Samt2Q497M0 247 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr332Q5NC45 344 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Fmr1nbQ80ZA7 238 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cdk5rap1Q8BTW8 588 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1427Q8VFU9 311 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 IcaQ9DBD0 700 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ndrg2Q9QYG0 371 aaKnown RBP9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cldn34dA2AGU5 210 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1095A3KPP7 308 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Scml2B1AVB3 969 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm20503G3UZK1 150 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Rplp1P47955 114 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Nrsn2Q5HZK2 202 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 AtcayQ8BHE3 372 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Kbtbd11Q8BNW9 633 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vrk3Q8K3G5 453 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 P2rx2Q8K3P1 485 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Asb16Q8VHS5 453 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tm4sf5Q91XF2 196 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 2610524H06RikQ9CZU9 139 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Sval1Q9D2X6 151 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 FastkQ9JIX9 511 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Usp36B1AQJ2 1098 aaKnown RBP9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr432E9Q8M2 312 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr335-psQ7TRY6 312 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Hbq1aQ8BYM1 145 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Akr7a2Q8CG76 367 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 CmblQ8R1G2 245 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr979Q8VH10 311 aa9.21□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm13547A2ARC0 163 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zfp229E9PWT2 705 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 GmlE9PX31 176 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr547E9PXN3 311 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rpp30O88796 268 aaKnown RBP9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Klk1b9P15949 261 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Hmga1P17095 107 aaKnown RBP9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Acyp2P56375 106 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 TpppQ7TQD2 218 aaKnown RBP9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr923Q7TRB9 317 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Reps2Q80XA6 521 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Sh2d7Q8BI17 458 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tnfsfm13Q8BXS2 410 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr346Q8VGJ7 309 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Snapc3Q9D2C9 407 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rep15Q9D7T1 230 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Hacd1Q9QY80 281 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Plp2Q9R1Q7 152 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Sfrp5Q9WU66 314 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Thbs4Q9Z1T2 963 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm4175D3YTW8 314 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm15737D3YZR0 106 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Cyp2d37-psF6YKB5 150 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vmn1r114L7N226 321 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Vmn1r126L7N2C8 321 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Zfand5O88878 213 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Klk1P15947 261 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 XylbQ3TNA1 551 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 DhpsQ3TXU5 369 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tle1Q62440 770 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 C130079G13RikQ8BUY2 280 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr1170Q8VFG1 316 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gabrg1Q9R0Y8 465 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mia3Q8BI84 1930 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Adam34A2RSG8 714 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Abcd4O89016 606 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Dpagt1P42867 410 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr132Q7TRI8 313 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Clec14aQ8VCP9 459 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tmem51Q99LG1 249 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Pop4Q9CR08 221 aa9.21□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gm21731A0A286YDE9 180 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Htr5aP30966 357 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 DmwdQ08274 665 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mex3dQ3UE17 643 aaKnown RBP9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Adora3Q61618 319 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 SargQ8BI29 606 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Gtf2h5Q8K2X8 71 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Znf768Q8R0T2 568 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr510Q8VEW6 314 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Mcts1Q9DB27 181 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Tas2r4Q9JKT3 297 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Igkv17-121A0A0G2JFA8 117 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Olfr709-ps1A0A140T8J9 307 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Hmgn2P09602 90 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Rims4P60191 269 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 A4gntQ14BT6 341 aa9.2□□□□□ -0.94
Ubr1-201ENSMUST00000028728 Sys1Q78S06 156 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms