RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 FAAP20Q6NZ36 180 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 ZNF782Q6ZMW2 699 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-216ENST00000641375 TRAPPC6BQ86SZ2 158 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 PXT1Q8NFP0 134 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 OR10K1Q8NGX5 313 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 LILRB1Q8NHL6 650 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-216ENST00000641375 WBP1Q96G27 269 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 OPN3Q9H1Y3 402 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-216ENST00000641375 ZNF71Q9NQZ8 489 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-216ENST00000641375 AUP1Q9Y679 476 aa14.17□□□□□ -0.14
PHGDH-216ENST00000641375 A0A1W2PR80 420 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 C7orf66A4D0T2 115 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 LINC00862A6NCI5 91 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 CD300LBA8K4G0 201 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 ZNF736B4DX44 427 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PEX14O75381 377 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 IGKV3-15P01624 115 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PRKACAP17612 351 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 TMEM50BP56557 158 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 B2MP61769 119 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PRDX4Q13162 271 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 RBMS2Q15434 407 aaKnown RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 CXorf67Q86X51 503 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 ZDHHC23Q8IYP9 409 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 Q8NA96 180 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 OR8S1Q8NH09 359 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 FYTTD1Q96QD9 318 aaKnown RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 SPRY1O43609 319 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 TDGF1P3P51864 188 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PDZK1IP1Q13113 114 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 CEACAM21Q3KPI0 293 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 LINC00303Q3SY05 128 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PLAC9Q5JTB6 97 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 MRPS24Q96EL2 167 aaKnown RBP14.16□□□□□ -0.14
PHGDH-216ENST00000641375 IFT46Q9NQC8 304 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 IL36GQ9NZH8 169 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 GPR160Q9UJ42 338 aa14.16□□□□□ -0.14
PHGDH-216ENST00000641375 PTPRQQ9UMZ3 2332 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 A0A0A6YYJ9 748 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 ANKRD30BLA7E2S9 258 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 PRAF2O60831 178 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 NDUFB6O95139 128 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 HTR3BO95264 441 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 RAB3DO95716 219 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 CD74P04233 296 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 CELA3BP08861 270 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 RRAS2P62070 204 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-216ENST00000641375 IKZF1Q13422 519 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 TSC22D1Q15714 1073 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 CISD2Q8N5K1 135 aaKnown RBP14.15□□□□□ -0.14
PHGDH-216ENST00000641375 WDR31Q8NA23 367 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 ZSCAN4Q8NAM6 433 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-216ENST00000641375 NUDCD2Q8WVJ2 157 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 Q96M66 194 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 HIST1H2AAQ96QV6 131 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 SFXN3Q9BWM7 321 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 POFUT1Q9H488 388 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 NKIRAS2Q9NYR9 191 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 RAXQ9Y2V3 346 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 MPC1Q9Y5U8 109 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 SPTBN4Q9H254 2564 aa14.15□□□□□ -0.14
PHGDH-216ENST00000641375 FOXI3A8MTJ6 420 aaPredicted RBP14.15□□□□□ -0.15
PHGDH-216ENST00000641375 MFNGO00587 321 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 PRRG2O14669 202 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 ANGPTL7O43827 346 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 SMPD2O60906 423 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 PLATP00750 562 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 C1QBP02746 253 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 BLVRBP30043 206 aaPredicted RBP14.15□□□□□ -0.15
PHGDH-216ENST00000641375 UNQ6126/PRO20091Q6UXV3 157 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 FBXW12Q6X9E4 464 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 MYPOPQ86VE0 399 aaPredicted RBP14.15□□□□□ -0.15
PHGDH-216ENST00000641375 NAXEQ8NCW5 288 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 OR4D10Q8NGI6 311 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 DVL3Q92997 716 aaPredicted RBP14.15□□□□□ -0.15
PHGDH-216ENST00000641375 ARHGAP5-AS1Q96IT6 56 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 KCNK7Q9Y2U2 307 aa14.15□□□□□ -0.15
PHGDH-216ENST00000641375 PQLC2LA1A4F0 135 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 SERPINE3A8MV23 424 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 CEACAM8P31997 349 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-216ENST00000641375 CXADRP78310 365 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 MEF2DQ14814 521 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 BHLHA15Q7RTS1 189 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-216ENST00000641375 OR5A2Q8NGI9 324 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 OR51F2Q8NH61 342 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 OR10A4Q9H209 315 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 OR51B6Q9H340 312 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 GHITMQ9H3K2 345 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 TUBD1Q9UJT1 453 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 AMDHD2Q9Y303 409 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 BSNQ9UPA5 3926 aa14.14□□□□□ -0.15
PHGDH-216ENST00000641375 FCER2P06734 321 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 TBPP20226 339 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 CBX5P45973 191 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 PPP1CBP62140 327 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 RPRMLQ8N4K4 120 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 OR51S1Q8NGJ8 323 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 OR10Z1Q8NGY1 313 aa14.13□□□□□ -0.15
PHGDH-216ENST00000641375 SCP2D1Q9UJQ7 156 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms