RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 PROK1P58294 105 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 DEFA6Q01524 100 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ATP6AP1Q15904 470 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 BCL2L15Q5TBC7 163 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 SLX4IPQ5VYV7 408 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 NXNL2Q5VZ03 156 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 C12orf73Q69YU5 71 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 DHRS7BQ6IAN0 325 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 HCP5Q6MZN7 132 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ACP7Q6ZNF0 438 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 BATF2Q8N1L9 274 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ZSCAN4Q8NAM6 433 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 POC1AQ8NBT0 407 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 TMEM163Q8TC26 289 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 C17orf50Q8WW18 174 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ITFG2Q969R8 447 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 SDSLQ96GA7 329 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 C19orf12Q9NSK7 152 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 H2AFY2Q9P0M6 372 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 OR52A1Q9UKL2 312 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 R4GMQ9 66 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 H0YAE9 185 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 MTRF1O75570 445 aaKnown RBP11.37□□□□□ -0.59
LINC00339-211ENST00000641009 PGA5P0DJD9 388 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 ACSM1Q08AH1 577 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 BLMHQ13867 455 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 SMIM21Q3B7S5 101 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 CLVS2Q5SYC1 327 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 KDM4DQ6B0I6 523 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 AMIGO2Q86SJ2 522 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 ELMOD2Q8IZ81 293 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 CD177Q8N6Q3 437 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 OR51G2Q8NGK0 314 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 TBX5Q99593 518 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 MOB1AQ9H8S9 216 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 CLN6Q9NWW5 311 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 RASL12Q9NYN1 266 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 MRM2Q9UI43 246 aaKnown RBP11.37□□□□□ -0.59
LINC00339-211ENST00000641009 SLC22A13Q9Y226 551 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 V9GYS6 101 aa11.37□□□□□ -0.59
LINC00339-211ENST00000641009 TRBV23-1A0A0A0MS06 115 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF670-ZNF695F2Z2N8 137 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 H3BSH0 61 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 J3QT63 122 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 CLPXO76031 633 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 RPP14O95059 124 aaKnown RBP11.36□□□□□ -0.59
LINC00339-211ENST00000641009 BNIP1Q12981 228 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 TMEM42Q69YG0 159 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 ASRGL1Q7L266 308 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF573Q86YE8 665 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 ZDHHC13Q8IUH4 622 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 OR14K1Q8NGZ2 314 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 MNTQ99583 582 aa11.36□□□□□ -0.59
LINC00339-211ENST00000641009 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 M0QZ24 198 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 DLGAP1O14490 977 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 TIMM23O14925 209 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 NXPH2O95156 264 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 APOL3O95236 402 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 FASP25445 335 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 PAX6P26367 422 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 PRDX2P32119 198 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 ACTR3P61158 418 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 EGR3Q06889 387 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 ODF4Q2M2E3 257 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 MIDNQ504T8 468 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 ASPHD2Q6ICH7 369 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 GID4Q8IVV7 300 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 MKXQ8IYA7 352 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 OR4M1Q8NGD0 313 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 OR5D13Q8NGL4 314 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 CIB1Q99828 191 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 NRIP2Q9BQI9 281 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 PPA2Q9H2U2 334 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 OR14J1Q9UGF5 321 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 SF3B6Q9Y3B4 125 aaKnown RBP11.35□□□□□ -0.59
LINC00339-211ENST00000641009 AP4S1Q9Y587 144 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 SNX5Q9Y5X3 404 aa11.35□□□□□ -0.59
LINC00339-211ENST00000641009 KIAA2026Q5HYC2 2103 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 H3BUX3 64 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 SLC1A7O00341 560 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 NOS1APO75052 506 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-211ENST00000641009 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
LINC00339-211ENST00000641009 TGFBR2P37173 567 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 ERVFRD-1P60508 538 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 RPL31P62899 125 aaKnown RBP11.34□□□□□ -0.59
LINC00339-211ENST00000641009 OCLNQ16625 522 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 C1orf146Q5VVC0 180 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 TMEM200BQ69YZ2 307 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 Q6ZSR3 168 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 ANGPTL5Q86XS5 388 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 CALHM1Q8IU99 346 aa11.34□□□□□ -0.59
LINC00339-211ENST00000641009 YIPF7Q8N8F6 280 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms