RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
PNKP-230ENST00000638016 KPTNQ9Y664 436 aa14.56□□□□□ -0.08
PNKP-230ENST00000638016 FAM181BA6NEQ2 426 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 RFPL4AA6NLU0 287 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 RFPL4AL1F8VTS6 287 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 J3QT63 122 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 ATP6V1E1P36543 226 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 FOXL1Q12952 345 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 C16orf87Q6PH81 154 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 FIP1L1Q6UN15 594 aaKnown RBP14.55□□□□□ -0.08
PNKP-230ENST00000638016 ZNF671Q8TAW3 534 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 HRASLS5Q96KN8 279 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 DNTTIP1Q9H147 329 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 UNKLQ9H9P5 680 aaKnown RBP14.55□□□□□ -0.08
PNKP-230ENST00000638016 C19orf12Q9NSK7 152 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 IMPAD1Q9NX62 359 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 GNG8Q9UK08 70 aa14.55□□□□□ -0.08
PNKP-230ENST00000638016 IGKV1-27A0A075B6S5 117 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 A0A1B0GVI7 797 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 FAM230AA0A1W2PPH8 454 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 DLGAP1O14490 977 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 SYT7O43581 403 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 INMTO95050 263 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 IGHV4-59P01825 116 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 PGA5P0DJD9 388 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 ALDH3A2P51648 485 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 ISL1P61371 349 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 RELBQ01201 579 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 UBE2V2Q15819 145 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 TNFRSF14Q92956 283 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 RNFT2Q96EX2 444 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 MED30Q96HR3 178 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 SLC29A1Q99808 456 aa14.54□□□□□ -0.08
PNKP-230ENST00000638016 TRRAPQ9Y4A5 3859 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 LOC107986453A0A1B0GWG9 222 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 A0A1W2PQ09 198 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 ANKRD61A6NGH8 418 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 F8VVB4 439 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 F8VWA3 439 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 SULT1C4O75897 302 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 CAPZA1P52907 286 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 CAV3P56539 151 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 BPIFB3P59826 476 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 C11orf91Q3C1V1 193 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 FAM185AQ8N0U4 392 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 RFKQ969G6 155 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 SDSLQ96GA7 329 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 NRIP2Q9BQI9 281 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 ZNF747Q9BV97 191 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 PLEKHA1Q9HB21 404 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 NOX4Q9NPH5 578 aa14.53□□□□□ -0.08
PNKP-230ENST00000638016 MEX3AA1L020 520 aaKnown RBP14.52□□□□□ -0.09
PNKP-230ENST00000638016 J3QRE1 110 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 GPR37O15354 613 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 OR12D2P58182 307 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 NANOS3P60323 173 aaKnown RBP14.52□□□□□ -0.09
PNKP-230ENST00000638016 ERVFRD-1P60508 538 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 SRSF4Q08170 494 aaKnown RBP14.52□□□□□ -0.09
PNKP-230ENST00000638016 ZFP1Q6P2D0 407 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 ZNF573Q86YE8 665 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 KIR3DL3Q8N743 410 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 C17orf50Q8WW18 174 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 S100A14Q9HCY8 104 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 OR14J1Q9UGF5 321 aa14.52□□□□□ -0.09
PNKP-230ENST00000638016 MGAM2Q2M2H8 2515 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 DHRS7CA6NNS2 312 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 NXPH2O95156 264 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 GABRB1P18505 474 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 MPZP25189 248 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 PAX6P26367 422 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 SNRPGP62308 76 aaKnown RBP14.51□□□□□ -0.09
PNKP-230ENST00000638016 TMED1Q13445 227 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 SMIM21Q3B7S5 101 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 HCP5Q6MZN7 132 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 FAM220AQ7Z4H9 259 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 ENTHD1Q8IYW4 607 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 CMTM4Q8IZR5 234 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 OR4M1Q8NGD0 313 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 OR2G2Q8NGZ5 317 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 OR10AC1Q8NH08 325 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 TRUB1Q8WWH5 349 aaKnown RBP14.51□□□□□ -0.09
PNKP-230ENST00000638016 ITFG2Q969R8 447 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 SLAMF9Q96A28 289 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 ADAT3Q96EY9 351 aaPredicted RBP14.51□□□□□ -0.09
PNKP-230ENST00000638016 HES4Q9HCC6 221 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 C1RLQ9NZP8 487 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 IL36RNQ9UBH0 155 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.51□□□□□ -0.09
PNKP-230ENST00000638016 ORC6Q9Y5N6 252 aa14.51□□□□□ -0.09
PNKP-230ENST00000638016 NPFFO15130 113 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 NOS1APO75052 506 aaPredicted RBP14.5□□□□□ -0.09
PNKP-230ENST00000638016 PRDX2P32119 198 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 ERVK11-1P61568 191 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 ZNF91Q05481 1191 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 OCLNQ16625 522 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 METAP1DQ6UB28 335 aaPredicted RBP14.5□□□□□ -0.09
PNKP-230ENST00000638016 RNF144BQ7Z419 303 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 LDLRAD3Q86YD5 345 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 SSMEM1Q8WWF3 244 aa14.5□□□□□ -0.09
PNKP-230ENST00000638016 LGALS12Q96DT0 336 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms