RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 IL36GQ9NZH8 169 aa5.69□□□□□ -1.5
UPF3B-205ENST00000636792 NPTNQ9Y639 398 aa5.69□□□□□ -1.5
UPF3B-205ENST00000636792 DYSFO75923 2080 aa5.69□□□□□ -1.5
UPF3B-205ENST00000636792 IGHV1-69-2A0A0G2JMI3 117 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF850A8MQ14 1090 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 SRRM5B3KS81 715 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 CLDN25C9JDP6 229 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 EREGO14944 169 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 NDUFA2O43678 99 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 BPNT1O95861 308 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 HCKP08631 526 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 IRF2P14316 349 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 SRMP19623 302 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 RAB3BP20337 219 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 CALRP27797 417 aaKnown RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 SOX2P48431 317 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 PTH2RP49190 550 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 MAB21L1Q13394 359 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 UBE2V2Q15819 145 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 HFEQ30201 348 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 DEFB113Q30KQ7 82 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 ALKBH6Q3KRA9 238 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 NHLRC3Q5JS37 347 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 C1orf100Q5SVJ3 147 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 DDI2Q5TDH0 399 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 SHEQ5VZ18 495 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 FIP1L1Q6UN15 594 aaKnown RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 MOB3CQ70IA8 216 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 PEG10Q86TG7 708 aaKnown RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 LINC00596Q86U02 117 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 MUC20Q8N307 709 aaPredicted RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 OR10AD1Q8NGE0 317 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 OR6M1Q8NGM8 313 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 OR13C5Q8NGS8 318 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF671Q8TAW3 534 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 TIMD4Q96H15 378 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 RNF170Q96K19 258 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 VRK1Q99986 396 aaPredicted RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 SOX7Q9BT81 388 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 FAM192AQ9GZU8 254 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 GSX1Q9H4S2 264 aaPredicted RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 MSL2Q9HCI7 577 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 EXOSC4Q9NPD3 245 aaKnown RBP5.68□□□□□ -1.5
UPF3B-205ENST00000636792 RASL12Q9NYN1 266 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 TAS2R4Q9NYW5 299 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 PPP1R3CQ9UQK1 317 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 PLEKHA6Q9Y2H5 1048 aa5.68□□□□□ -1.5
UPF3B-205ENST00000636792 TRAV8-7A0A075B6U6 113 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 IGKV1-9A0A0C4DH69 117 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A10PA6NDY2 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A18PA6NE21 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A16PA6NEW6 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A20PA6NIJ5 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A8PA6NJQ4 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A7PA6NKC0 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A22PA8MWA6 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A12PA8MX19 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A5PA8MXJ8 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A23PA8MXZ1 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF732B4DXR9 585 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 F5H5P2 479 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 AIPO00170 330 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SLC17A2O00624 439 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 PIN1P1O15428 100 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SPRY3O43610 288 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SCGNO76038 276 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A15PP0C7V4 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A13PP0C7W8 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A14PP0C7W9 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 FAM90A24PP0C7X0 464 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 NAT2P11245 290 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 MUC1P15941 1255 aaPredicted RBP5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GADD45AP24522 165 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GIFP27352 417 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ZNF93P35789 620 aaPredicted RBP5.67□□□□□ -1.5
UPF3B-205ENST00000636792 HAAOP46952 286 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 PDLIM4P50479 330 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GPM6AP51674 278 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 MTCP1P56278 107 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM33P57088 247 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ZP1P60852 638 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 CCL8P80075 99 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 KISS1Q15726 138 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SMIM21Q3B7S5 101 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 TMEM155Q4W5P6 130 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 CEP78Q5JTW2 689 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SPIN3Q5JUX0 258 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 GPR107Q5VW38 600 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ELP2Q6IA86 826 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 C22orf42Q6IC83 251 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ASPHD2Q6ICH7 369 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 CLEC2AQ6UVW9 174 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 ASCL4Q6XD76 172 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 SLC16A12Q6ZSM3 486 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 USP43Q70EL4 1123 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 OR2W3Q7Z3T1 314 aa5.67□□□□□ -1.5
UPF3B-205ENST00000636792 LRRTM1Q86UE6 522 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms