RNA–Protein interactions for RNA: ENST00000635973.1

CLN3-243, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-243ENST00000635973 RPS2P15880 293 aaKnown RBP15.16■□□□□ 0.02
CLN3-243ENST00000635973 EGR1P18146 543 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 FUT6P51993 359 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 GABARAPL2P60520 117 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 HOXA4Q00056 320 aaPredicted RBP15.16■□□□□ 0.02
CLN3-243ENST00000635973 BDH1Q02338 343 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 IRF3Q14653 427 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 UBE2V2Q15819 145 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 FAM76BQ5HYJ3 339 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 UTS2BQ765I0 119 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 OR13C9Q8NGT0 318 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 OR10Z1Q8NGY1 313 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 ZNF671Q8TAW3 534 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 RGP1Q92546 391 aaPredicted RBP15.16■□□□□ 0.02
CLN3-243ENST00000635973 OR5M11Q96RB7 305 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 NEK6Q9HC98 313 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 NBEAL1Q6ZS30 2694 aa15.16■□□□□ 0.02
CLN3-243ENST00000635973 A0A0G2JMP0 313 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 A0A0X1KG70 313 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 CEACAM18A8MTB9 384 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 J3QT63 122 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 HSMCR30P0CW71 290 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 ATF1P18846 271 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 PRKACBP22694 351 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 AZGP1P25311 298 aaKnown RBP15.15■□□□□ 0.02
CLN3-243ENST00000635973 ZNF404Q494X3 552 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 YIF1BQ5BJH7 314 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 SERPINA12Q8IW75 414 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 GCSAMQ8N6F7 178 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 OR4M2Q8NGB6 313 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 OR5D14Q8NGL3 314 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 OR13C5Q8NGS8 318 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 ZNF418Q8TF45 676 aaPredicted RBP15.15■□□□□ 0.02
CLN3-243ENST00000635973 SPSB1Q96BD6 273 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 ZCCHC4Q9H5U6 513 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 DNAJB11Q9UBS4 358 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 POLDIP2Q9Y2S7 368 aa15.15■□□□□ 0.02
CLN3-243ENST00000635973 IGHV3OR15-7A0A075B7D8 119 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 A0A0A6YYJ9 748 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 AKR7A2O43488 359 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 PLPP2O43688 288 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 RHBDL1O75783 438 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 FSTL3O95633 263 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 PLATP00750 562 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 MAP2K4P45985 399 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 RBP2P50120 134 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 ACSM1Q08AH1 577 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 LHFPL2Q6ZUX7 228 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 NLRC3Q7RTR2 1065 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 AQP3Q92482 292 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 UFD1Q92890 307 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 TMEM106AQ96A25 262 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 PGLYRP3Q96LB9 341 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 OPALINQ96PE5 141 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 TMEM246Q9BRR3 403 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 YTHDF1Q9BYJ9 559 aaKnown RBP15.14■□□□□ 0.01
CLN3-243ENST00000635973 PATZ1Q9HBE1 687 aaKnown RBP15.14■□□□□ 0.01
CLN3-243ENST00000635973 TMEM165Q9HC07 324 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 LSM2Q9Y333 95 aaKnown RBP15.14■□□□□ 0.01
CLN3-243ENST00000635973 ANK2Q01484 3957 aa15.14■□□□□ 0.01
CLN3-243ENST00000635973 SRRM5B3KS81 715 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 LHBP01229 141 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 HCKP08631 526 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 GLRA1P23415 457 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 CFHR2P36980 270 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 ATP1B3P54709 279 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 MTCP1P56278 107 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 PPP3R1P63098 170 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 DOC2BQ14184 412 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 TBCEQ15813 527 aaPredicted RBP15.13■□□□□ 0.01
CLN3-243ENST00000635973 MICBQ29980 383 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 DCAF12L2Q5VW00 463 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 DCDC5Q6ZRR9 648 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 ANGPTL5Q86XS5 388 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 SVOPQ8N4V2 548 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 PARP16Q8N5Y8 322 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 DNAAF1Q8NEP3 725 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 TAS2R4Q9NYW5 299 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 MIOXQ9UGB7 285 aa15.13■□□□□ 0.01
CLN3-243ENST00000635973 IGKV1-9A0A0C4DH69 117 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 MAGEB3O15480 346 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 SULT1B1O43704 296 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 SYNGR1O43759 233 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 MRPS14O60783 128 aaKnown RBP15.12■□□□□ 0.01
CLN3-243ENST00000635973 CYB5AP00167 134 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 GYPAP02724 150 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 MUC1P15941 1255 aaPredicted RBP15.12■□□□□ 0.01
CLN3-243ENST00000635973 RAB3AP20336 220 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 POU3F4P49335 361 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 Q499Y3 187 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 ESCO2Q56NI9 601 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 TEX36Q5VZQ5 186 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 ZNF367Q7RTV3 350 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 OR8B3Q8NGG8 313 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 OR8B2Q96RD0 313 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 TMED9Q9BVK6 235 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 PKIBQ9C010 78 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 CKLFQ9UBR5 152 aa15.12■□□□□ 0.01
CLN3-243ENST00000635973 LOC105371242A0A075B767 164 aa15.11■□□□□ 0.01
CLN3-243ENST00000635973 TRBV5-5A0A0J9YX44 114 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms