RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 CNN3Q15417 329 aaKnown RBP12.92□□□□□ -0.34
LINC00339-209ENST00000635450 TMPRSS11AQ6ZMR5 421 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 TRMT10AQ8TBZ6 339 aaKnown RBP12.92□□□□□ -0.34
LINC00339-209ENST00000635450 PP6455Q8WZ26 134 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 AQP3Q92482 292 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-209ENST00000635450 TMIGD2Q96BF3 282 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 JAM3Q9BX67 310 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 CHST5Q9GZS9 411 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 COMMD4Q9H0A8 199 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 SNTG1Q9NSN8 517 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 KAAG1Q9UBP8 84 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 CTSZQ9UBR2 303 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 POLDIP2Q9Y2S7 368 aa12.92□□□□□ -0.34
LINC00339-209ENST00000635450 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
LINC00339-209ENST00000635450 TRAV40A0A0B4J280 105 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 IGHV2-70DA0A0C4DH43 119 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 MDFIC2A0A1B0GVS7 189 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 FAM230AA0A1W2PPH8 454 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 PQLC2LA1A4F0 135 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 NKX6-3A6NJ46 265 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 C22orf46C9J442 243 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 J3QT63 122 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 FCN3O75636 299 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 RHBDL1O75783 438 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 GNAO1P09471 354 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 OCM2P0CE71 109 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 LIMS3P0CW19 117 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 LIMS4P0CW20 117 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 PAX8Q06710 450 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 OR5T2Q8NGG2 359 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 OR13C3Q8NGS6 347 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 GCDHQ92947 438 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 SEH1LQ96EE3 360 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 BORCS8Q96FH0 119 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 CCL13Q99616 98 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 NUDT16L1Q9BRJ7 211 aaKnown RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 ZNF649Q9BS31 505 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 DNTTIP1Q9H147 329 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 WDR13Q9H1Z4 485 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 NLKQ9UBE8 527 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 NUP50Q9UKX7 468 aa12.91□□□□□ -0.34
LINC00339-209ENST00000635450 DIMT1Q9UNQ2 313 aaKnown RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 CAB39Q9Y376 341 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-209ENST00000635450 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 TMEM212A6NML5 194 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 H0YJX3 145 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 DVL1O14640 695 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 NDUFB3O43676 98 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 ENSAO43768 121 aaKnown RBP12.9□□□□□ -0.34
LINC00339-209ENST00000635450 TGM4P49221 684 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 ETV1P50549 477 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 FUT6P51993 359 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 UBE2V2Q15819 145 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 AWAT1Q58HT5 328 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 STUMQ69YW2 141 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 OR5AK2Q8NH90 309 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 ST8SIA4Q92187 359 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 FGGYQ96C11 551 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 MED30Q96HR3 178 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 RASSF4Q9H2L5 321 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 RASL12Q9NYN1 266 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 PKD1L1Q8TDX9 2849 aa12.9□□□□□ -0.34
LINC00339-209ENST00000635450 TRBV2A0A0J9YWF9 115 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 KIR2DS1A0A191URI9 304 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 OR2AT4A6NND4 320 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 ECDO95905 644 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 LIPFP07098 398 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 GABRA2P47869 451 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 AQP4P55087 323 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 C11orf91Q3C1V1 193 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 LRRC10Q5BKY1 277 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 PNLDC1Q8NA58 520 aaKnown RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 GGHQ92820 318 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 ADAT3Q96EY9 351 aaPredicted RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 PKIBQ9C010 78 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 NEK6Q9HC98 313 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 CNOT2Q9NZN8 540 aaKnown RBP12.89□□□□□ -0.35
LINC00339-209ENST00000635450 TRRAPQ9Y4A5 3859 aa12.89□□□□□ -0.35
LINC00339-209ENST00000635450 GPR37O15354 613 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 SYNGR1O43759 233 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 NXPH2O95156 264 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 ZFPL1O95159 310 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
LINC00339-209ENST00000635450 PIPP12273 146 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms