RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 IGKV1-9A0A0C4DH69 117 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 NTN3O00634 580 aaPredicted RBP6.56□□□□□ -1.36
PKP4-217ENST00000628904 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
PKP4-217ENST00000628904 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
PKP4-217ENST00000628904 M6PRP20645 277 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 FCGR2CP31995 323 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 THRSPQ92748 146 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 FOXRED1Q96CU9 486 aaPredicted RBP6.56□□□□□ -1.36
PKP4-217ENST00000628904 HRH4Q9H3N8 390 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 VSIG4Q9Y279 399 aa6.56□□□□□ -1.36
PKP4-217ENST00000628904 UBE2J1Q9Y385 318 aaPredicted RBP6.56□□□□□ -1.36
PKP4-217ENST00000628904 ERVH48-1M5A8F1 160 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 ZZEF1O43149 2961 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 C4BPBP20851 252 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 CPT2P23786 658 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 MRPS10P82664 201 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 PLAC9Q5JTB6 97 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 TEX30Q5JUR7 227 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 C9orf62Q8N4C0 152 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 SOSTQ9BQB4 213 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 MRPL13Q9BYD1 178 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 WDR13Q9H1Z4 485 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 SLA2Q9H6Q3 261 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 MSL2Q9HCI7 577 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 STARD10Q9Y365 291 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 A0A1W2PNU3 283 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 PHF1O43189 567 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 TPPPO94811 219 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 RLN2P04090 185 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 OR5H8P0DN80 308 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 HIST1H1DP16402 221 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 BMP5P22003 454 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 GLP1RP43220 463 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 ZNF616Q08AN1 781 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 ENDOGQ14249 297 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 CLINT1Q14677 625 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 SMCO1Q147U7 214 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 IAH1Q2TAA2 248 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 DTX1Q86Y01 620 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 PSMF1Q92530 271 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 CPNE4Q96A23 557 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 RBMXL1Q96E39 390 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 LPAR5Q9H1C0 372 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 TMEM131Q92545 1883 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 A0A1B0GTI1 187 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 ANKRD30BLA7E2S9 258 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 TRAPPC2LH3BP13 241 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 CNR1P21554 472 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 GABRA2P47869 451 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 CEBPDP49716 269 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 AIMP2Q13155 320 aaKnown RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 TMEM185AQ8NFB2 350 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 RNF166Q96A37 237 aaPredicted RBP6.55□□□□□ -1.36
PKP4-217ENST00000628904 CHRNA10Q9GZZ6 450 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.55□□□□□ -1.36
PKP4-217ENST00000628904 TMEM38BQ9NVV0 291 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 SESN1Q9Y6P5 492 aa6.55□□□□□ -1.36
PKP4-217ENST00000628904 LOC102725191A0A1B0GVB3 256 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 WDR1O75083 606 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 HPP00738 406 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 CELA3BP08861 270 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 CTAG1AP78358 180 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 ZNF239Q16600 458 aaKnown RBP6.54□□□□□ -1.36
PKP4-217ENST00000628904 LAMTOR1Q6IAA8 161 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 TEX261Q6UWH6 196 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 TMUB2Q71RG4 321 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 MKXQ8IYA7 352 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 PAQR4Q8N4S7 273 aaPredicted RBP6.54□□□□□ -1.36
PKP4-217ENST00000628904 ZIC4Q8N9L1 334 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 OR11L1Q8NGX0 322 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 LYZL4Q96KX0 146 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 CXorf58Q96LI9 332 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 GON7Q9BXV9 100 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 PROK2Q9HC23 129 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 EMC3Q9P0I2 261 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 U3KQ87 197 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 ARFGEF3Q5TH69 2177 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 LRRC3CA6NJW4 275 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 PCP4L1A6NKN8 68 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 DEFB108AA8MXU0 73 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 PRAF2O60831 178 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 NEURL1O76050 574 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 IFNA21P01568 189 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 CXCL2P19875 107 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 NME2P22392 152 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 S100A11P31949 105 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 GSK3AP49840 483 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 RAP2BP61225 183 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 HGFACQ04756 655 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 BTN1A1Q13410 526 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 IZUMO4Q1ZYL8 232 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 ZNF826PQ6ZT77 177 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 CALHM1Q8IU99 346 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 TCTE3Q8IZS6 198 aa6.54□□□□□ -1.36
PKP4-217ENST00000628904 ZNF808Q8N4W9 903 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms