RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 KLHL22Q53GT1 634 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 C1orf122Q6ZSJ8 110 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 CMTM4Q8IZR5 234 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 RNF166Q96A37 237 aaPredicted RBP18.47■□□□□ 0.55
SF1-220ENST00000626028 SDSLQ96GA7 329 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 GAFA1Q96PS6 74 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 PCGF1Q9BSM1 259 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 DCTN5Q9BTE1 182 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 ESM1Q9NQ30 184 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 GPR173Q9NS66 373 aa18.47■□□□□ 0.55
SF1-220ENST00000626028 SLC25A10Q9UBX3 287 aaPredicted RBP18.47■□□□□ 0.55
SF1-220ENST00000626028 IGKV1D-17A0A075B6S4 117 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 LOC107986453A0A1B0GWG9 222 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 RGS9O75916 674 aaPredicted RBP18.46■□□□□ 0.55
SF1-220ENST00000626028 PSG2P11465 335 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 PRTN3P24158 256 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 FUT6P51993 359 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 UBA52P62987 128 aaKnown RBP18.46■□□□□ 0.55
SF1-220ENST00000626028 IKZF1Q13422 519 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 METAP1DQ6UB28 335 aaPredicted RBP18.46■□□□□ 0.55
SF1-220ENST00000626028 ACP7Q6ZNF0 438 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 DNAAF1Q8NEP3 725 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 TBX15Q96SF7 602 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 NRIP2Q9BQI9 281 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 SNTG1Q9NSN8 517 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 FRRS1LQ9P0K9 344 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 ZNF222Q9UK12 451 aa18.46■□□□□ 0.55
SF1-220ENST00000626028 HTR1AP08908 422 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 KIR3DL2P43630 455 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 OR12D2P58182 307 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 GMFBP60983 142 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 CNN3Q15417 329 aaKnown RBP18.45■□□□□ 0.54
SF1-220ENST00000626028 ODF4Q2M2E3 257 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 BCL6BQ8N143 479 aaPredicted RBP18.45■□□□□ 0.54
SF1-220ENST00000626028 GATAD2BQ8WXI9 593 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 PELI1Q96FA3 418 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 HES4Q9HCC6 221 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 NOX4Q9NPH5 578 aa18.45■□□□□ 0.54
SF1-220ENST00000626028 TRBV23-1A0A0A0MS06 115 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 A0A1B0GW55 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 TMEM89A2RUT3 159 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 SFTPBP07988 381 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L2P0CJ85 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L3P0CJ86 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L4P0CJ87 422 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L5P0CJ88 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L6P0CJ89 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L7P0CJ90 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 ACTG1P63261 375 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 UBE2V2Q15819 145 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DGUOKQ16854 277 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DMRTC1Q5HYR2 192 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4L9Q6RFH8 374 aaPredicted RBP18.44■□□□□ 0.54
SF1-220ENST00000626028 UTS2BQ765I0 119 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 ZNF561Q8N587 486 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 SLC25A28Q96A46 364 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 C4orf36Q96KX1 117 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 ZNF48Q96MX3 618 aaPredicted RBP18.44■□□□□ 0.54
SF1-220ENST00000626028 ALG8Q9BVK2 526 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 JAM3Q9BX67 310 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 DUX4Q9UBX2 424 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 HHLA2Q9UM44 414 aa18.44■□□□□ 0.54
SF1-220ENST00000626028 TENM1Q9UKZ4 2725 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 CENPVL3A0A0U1RRI6 287 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 DNAJC9-AS1A6NH13 148 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 NXPH2O95156 264 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 GABRA2P47869 451 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 ERVK11-1P61568 191 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 ARF6P62330 175 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 ELF3P78545 371 aaPredicted RBP18.43■□□□□ 0.54
SF1-220ENST00000626028 BAMBIQ13145 260 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 TTC23Q5W5X9 447 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 NPRL2Q8WTW4 380 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 ERVK13-1Q9NX77 482 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 ANK2Q01484 3957 aa18.43■□□□□ 0.54
SF1-220ENST00000626028 IGHV1-69DA0A0B4J2H0 117 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 IRGMA1A4Y4 181 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 A6NIN4 97 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 J3QLW9 94 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 M0R1W7 72 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 SLC1A7O00341 560 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 SYNGR1O43759 233 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 IGHV1-69P01742 117 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 RNASE1P07998 156 aaKnown RBP18.42■□□□□ 0.54
SF1-220ENST00000626028 ZNF19P17023 458 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 NANOS3P60323 173 aaKnown RBP18.42■□□□□ 0.54
SF1-220ENST00000626028 CALHM1Q8IU99 346 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 Q8IYB0 196 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 SETD9Q8NE22 299 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 TBC1D15Q8TC07 691 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 GCDHQ92947 438 aaPredicted RBP18.42■□□□□ 0.54
SF1-220ENST00000626028 SPSB1Q96BD6 273 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 BORCS8Q96FH0 119 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 UNKLQ9H9P5 680 aaKnown RBP18.42■□□□□ 0.54
SF1-220ENST00000626028 MAB21L2Q9Y586 359 aa18.42■□□□□ 0.54
SF1-220ENST00000626028 IGHV3OR16-10A0A075B7F0 116 aa18.41■□□□□ 0.54
SF1-220ENST00000626028 RFPL4AA6NLU0 287 aa18.41■□□□□ 0.54
SF1-220ENST00000626028 OR4C45A6NMZ5 311 aa18.41■□□□□ 0.54
SF1-220ENST00000626028 RFPL4AL1F8VTS6 287 aa18.41■□□□□ 0.54
SF1-220ENST00000626028 KNG1P01042 644 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms